Trackastra: Transformer-based cell tracking for live-cell microscopy

B Gallusser, M Weigert - European Conference on Computer Vision, 2024 - Springer
Cell tracking is a ubiquitous image analysis task in live-cell microscopy. Unlike multiple
object tracking (MOT) for natural images, cell tracking typically involves hundreds of similar …

Robust approximate characterization of single-cell heterogeneity in microbial growth

RD Paul, J Seiffarth, H Scharr… - 2024 IEEE International …, 2024 - ieeexplore.ieee.org
Live-cell microscopy allows to go beyond measuring average features of cellular
populations to observe, quantify and explain biological heterogeneity. Deep Learning-based …

[HTML][HTML] AI-based automated active learning for discovery of hidden dynamic processes: A use case in light microscopy

N Friederich, AJ Yamachui Sitcheu… - … : Berlin, 23.-24 …, 2023 - books.google.com
In the biomedical environment, experiments assessing dynamic processes are primarily
performed by a human acquisition supervisor. Contemporary implementations of such …

EAP4EMSIG--Experiment Automation Pipeline for Event-Driven Microscopy to Smart Microfluidic Single-Cells Analysis

N Friederich, AJY Sitcheu, A Nassal, M Pesch… - arXiv preprint arXiv …, 2024 - arxiv.org
Microfluidic Live-Cell Imaging (MLCI) generates high-quality data that allows
biotechnologists to study cellular growth dynamics in detail. However, obtaining these …

Customizable and Interactive Visualizations for Investigating Spatio-Temporal Single-Cell Information

J Seiffarth, L Blöbaum, A Grünberger… - 2024 IEEE International …, 2024 - ieeexplore.ieee.org
Modern live-cell imaging and machine-learning based image processing methods shed light
on the secrets of the behavior and characteristics of individual cells including their growth …

Analyzing the Influence of Synthetic andAugmented Data on Segmentation Model

A Peschel - 2023 - diva-portal.org
Abstract The field of Artificial Intelligence (AI) has experienced unprecedented growth in
recent years, thanks to the numerous applications related to speech recognition, natural …