Three‐dimensional reconstruction of single particles from random and nonrandom tilt series

M Radermacher - Journal of electron microscopy technique, 1988 - Wiley Online Library
To overcome the radiation damage‐induced limitations to the resolution of three‐
dimensional reconstructions from electron microscopic tilt series, novel reconstruction …

Adding the third dimension to virus life cycles: three-dimensional reconstruction of icosahedral viruses from cryo-electron micrographs

TS Baker, NH Olson, SD Fuller - Microbiology and Molecular …, 1999 - Am Soc Microbiol
Viruses are cellular parasites. The linkage between viral and host functions makes the study
of a viral life cycle an important key to cellular functions. A deeper understanding of many …

[PDF][PDF] New tools for the analysis and validation of cryo-EM maps and atomic models

PV Afonine, BP Klaholz, NW Moriarty… - … Section D: Structural …, 2018 - journals.iucr.org
Recent advances in the field of electron cryomicroscopy (cryo-EM) have resulted in a rapidly
increasing number of atomic models of biomacromolecules that have been solved using this …

Deep learning-based mixed-dimensional Gaussian mixture model for characterizing variability in cryo-EM

M Chen, SJ Ludtke - Nature methods, 2021 - nature.com
Structural flexibility and/or dynamic interactions with other molecules is a critical aspect of
protein function. Cryogenic electron microscopy (cryo-EM) provides direct visualization of …

Parameter-free image resolution estimation based on decorrelation analysis

A Descloux, KS Grußmayer, A Radenovic - Nature methods, 2019 - nature.com
Super-resolution microscopy opened diverse new avenues of research by overcoming the
resolution limit imposed by diffraction. Exploitation of the fluorescent emission of individual …

Measuring image resolution in optical nanoscopy

RPJ Nieuwenhuizen, KA Lidke, M Bates, DL Puig… - Nature …, 2013 - nature.com
Resolution in optical nanoscopy (or super-resolution microscopy) depends on the
localization uncertainty and density of single fluorescent labels and on the sample's spatial …

Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy

PB Rosenthal, R Henderson - Journal of molecular biology, 2003 - Elsevier
A computational procedure is described for assigning the absolute hand of the structure of a
protein or assembly determined by single-particle electron microscopy. The procedure …

[图书][B] Advanced computing in electron microscopy

EJ Kirkland - 1998 - Springer
Earl J. Kirkland Third Edition Earl J. Kirkland Third Edition Page 1 Earl J. Kirkland Advanced
Computing in Electron Microscopy Third Edition Earl J. Kirkland Advanced Computing in …

SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields

J Frank, M Radermacher, P Penczek, J Zhu, Y Li… - Journal of structural …, 1996 - Elsevier
The SPIDER system has evolved into a comprehensive tool set for image processing,
making use of modern graphics interfacing in the VMS and UNIX environment. SPIDER and …

Fourier shell correlation threshold criteria

M Van Heel, M Schatz - Journal of structural biology, 2005 - Elsevier
The resolution value claimed for an electron microscopical three-dimensional reconstruction
indicates the overall quality of the experiment. The Fourier shell correlation (FSC) criterion …