Mathematical modeling and computational prediction of cancer drug resistance

X Sun, B Hu - Briefings in bioinformatics, 2018 - academic.oup.com
Diverse forms of resistance to anticancer drugs can lead to the failure of chemotherapy.
Drug resistance is one of the most intractable issues for successfully treating cancer in …

Noncoding RNAs databases: current status and trends

V Maracaja-Coutinho, AR Paschoal… - … biology of non-coding …, 2019 - Springer
One of the most important resources for researchers of noncoding RNAs is the information
available in public databases spread over the internet. However, the effective exploration of …

DRMref: comprehensive reference map of drug resistance mechanisms in human cancer

X Liu, J Yi, T Li, J Wen, K Huang, J Liu… - Nucleic Acids …, 2024 - academic.oup.com
Drug resistance poses a significant challenge in cancer treatment. Despite the initial
effectiveness of therapies such as chemotherapy, targeted therapy and immunotherapy …

CeDR Atlas: a knowledgebase of cellular drug response

YY Wang, H Kang, T Xu, L Hao, Y Bao… - Nucleic acids …, 2022 - academic.oup.com
Drug response to many diseases varies dramatically due to the complex genomics and
functional features and contexts. Cellular diversity of human tissues, especially tumors, is …

RNAactDrug: a comprehensive database of RNAs associated with drug sensitivity from multi-omics data

Q Dong, F Li, Y Xu, J Xiao, Y Xu, D Shang… - Briefings in …, 2020 - academic.oup.com
Drug sensitivity has always been at the core of individualized cancer chemotherapy.
However, we have been overwhelmed by large-scale pharmacogenomic data in the era of …

Functional reconstruction of human AML reveals stem cell origin and vulnerability of treatment-resistant MLL-rearranged leukemia

BB Zeisig, TK Fung, M Zarowiecki, CT Tsai… - Science Translational …, 2021 - science.org
Chemoresistance remains the major challenge for successful treatment of acute myeloid
leukemia (AML). Although recent mouse studies suggest that treatment response of …

Correlated motions and dynamics in different domains of epidermal growth factor receptor with L858R and T790M mutations

R Qureshi, A Ghosh, H Yan - IEEE/ACM Transactions on …, 2020 - ieeexplore.ieee.org
Non-small cell lung cancer with an activating epidermal growth factor receptor (EGFR)
mutation responds well to targeted drugs. In most cases, drug resistance appears after about …

Drug Repurposing for Targeting Acute Leukemia With KMT2A (MLL)—Gene Rearrangements

A Tsakaneli, O Williams - Frontiers in Pharmacology, 2021 - frontiersin.org
The treatment failure rates of acute leukemia with rearrangements of the Mixed Lineage
Leukemia (MLL) gene highlight the need for novel therapeutic approaches. Taking into …

Identifying gene network rewiring by integrating gene expression and gene network data

T Xu, L Ou-Yang, X Hu, XF Zhang - IEEE/ACM Transactions on …, 2018 - ieeexplore.ieee.org
Exploring the rewiring pattern of gene regulatory networks between different pathological
states is an important task in bioinformatics. Although a number of computational …

Identifying subpathway signatures for individualized anticancer drug response by integrating multi-omics data

Y Xu, Q Dong, F Li, Y Xu, C Hu, J Wang… - Journal of translational …, 2019 - Springer
Background Individualized drug response prediction is vital for achieving personalized
treatment of cancer and moving precision medicine forward. Large-scale multi-omics profiles …