Correlating enzymatic reactivity for different substrates using transferable data-driven collective variables

S Das, U Raucci, RPP Neves, MJ Ramos… - Proceedings of the …, 2024 - pnas.org
Machine learning (ML) is transforming the investigation of complex biological processes. In
enzymatic catalysis, one significant challenge is identifying the reactive conformations (RC) …

How and when does an enzyme react? Unraveling α-Amylase catalytic activity with enhanced sampling techniques

S Das, U Raucci, RPP Neves, MJ Ramos… - ACS …, 2023 - ACS Publications
Enzymatic catalysis is a complex process that can involve multiple conformations of the
enzyme: substrate complex and several competitive reaction pathways, resulting in a multi …

Selective steroidogenic cytochrome P450 haem iron ligation by steroid-derived isonitriles

AM Richard, NR Wong, K Harris, R Sundar… - Communications …, 2023 - nature.com
Alkyl isonitriles, R—NC, have previously been shown to ligate the heme (haem) iron of
cytochromes P450 in both accessible oxidation states (ferrous, Fe2+, and ferric, Fe3+) …

Tracking protein–protein interactions by NMR: conformational selection in human steroidogenic cytochrome P450 CYP17A1 induced by cytochrome b 5

AM Richard, DF Estrada, L Flynn… - Physical Chemistry …, 2024 - pubs.rsc.org
The human steroidogenic cytochrome P450 CYP17A1 catalyzes two types of reactions in
the biosynthetic pathway leading from pregnenolone to testosterone and several other …

[引用][C] 22nd International Conference on Cytochrome P450 (ICCP450).

JC Hackett - Journal of Inorganic Biochemistry, 2023 - europepmc.org
22nd International Conference on Cytochrome P450 (ICCP450). - Abstract - Europe PMC
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