A systematic review of the applications of artificial intelligence and machine learning in autoimmune diseases

IS Stafford, M Kellermann, E Mossotto, RM Beattie… - NPJ digital …, 2020 - nature.com
Autoimmune diseases are chronic, multifactorial conditions. Through machine learning (ML),
a branch of the wider field of artificial intelligence, it is possible to extract patterns within …

Machine learning for genetic prediction of psychiatric disorders: a systematic review

M Bracher-Smith, K Crawford, V Escott-Price - Molecular Psychiatry, 2021 - nature.com
Abstract Machine learning methods have been employed to make predictions in psychiatry
from genotypes, with the potential to bring improved prediction of outcomes in psychiatric …

Key parameters of tumor epitope immunogenicity revealed through a consortium approach improve neoantigen prediction

DK Wells, MM van Buuren, KK Dang… - Cell, 2020 - cell.com
Many approaches to identify therapeutically relevant neoantigens couple tumor sequencing
with bioinformatic algorithms and inferred rules of tumor epitope immunogenicity. However …

DOME: recommendations for supervised machine learning validation in biology

I Walsh, D Fishman, D Garcia-Gasulla, T Titma… - Nature …, 2021 - nature.com
DOME: recommendations for supervised machine learning validation in biology | Nature
Methods Skip to main content Thank you for visiting nature.com. You are using a browser version …

[HTML][HTML] Artificial intelligence applications in inflammatory bowel disease: emerging technologies and future directions

J Gubatan, S Levitte, A Patel, T Balabanis… - World journal of …, 2021 - ncbi.nlm.nih.gov
Inflammatory bowel disease (IBD) is a complex and multifaceted disorder of the
gastrointestinal tract that is increasing in incidence worldwide and associated with …

Genome interpretation using in silico predictors of variant impact

P Katsonis, K Wilhelm, A Williams, O Lichtarge - Human genetics, 2022 - Springer
Estimating the effects of variants found in disease driver genes opens the door to
personalized therapeutic opportunities. Clinical associations and laboratory experiments …

BIAS: Transparent reporting of biomedical image analysis challenges

L Maier-Hein, A Reinke, M Kozubek, AL Martel… - Medical image …, 2020 - Elsevier
The number of biomedical image analysis challenges organized per year is steadily
increasing. These international competitions have the purpose of benchmarking algorithms …

CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods

Genome biology, 2024 - Springer
Abstract Background The Critical Assessment of Genome Interpretation (CAGI) aims to
advance the state-of-the-art for computational prediction of genetic variant impact …

CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods

S Jain, C Bakolitsa, SE Brenner, P Radivojac… - Genome …, 2024 - lirias.kuleuven.be
Abstract Background: The Critical Assessment of Genome Interpretation (CAGI) aims to
advance the state-of-the-art for computational prediction of genetic variant impact …

A systematic review of artificial intelligence and machine learning applications to inflammatory bowel disease, with practical guidelines for interpretation

IS Stafford, MM Gosink, E Mossotto… - Inflammatory Bowel …, 2022 - academic.oup.com
Background Inflammatory bowel disease (IBD) is a gastrointestinal chronic disease with an
unpredictable disease course. Computational methods such as machine learning (ML) have …