Personalized medicine for patients with COPD: where are we?

FME Franssen, P Alter, N Bar… - … journal of chronic …, 2019 - Taylor & Francis
Chronic airflow limitation is the common denominator of patients with chronic obstructive
pulmonary disease (COPD). However, it is not possible to predict morbidity and mortality of …

Review of mathematical modeling of the inflammatory response in lung infections and injuries

SB Minucci, RL Heise, AM Reynolds - Frontiers in Applied …, 2020 - frontiersin.org
Lung inflammation may occur due to viral and bacterial infections, structural damage, or
inhalation of dangerous particles. These injuries may be quickly resolved by the immune …

Applying systems biology to biomedical research and health care: a précising definition of systems medicine

S Schleidgen, S Fernau, H Fleischer… - BMC health services …, 2017 - Springer
Background Systems medicine has become a key word in biomedical research. Although it
is often referred to as P4-(predictive, preventive, personalized and participatory)-medicine, it …

Guidelines for standardizing T‐cell cytometry assays to link biomarkers, mechanisms, and disease outcomes in type 1 diabetes

JHM Yang, KA Ward‐Hartstonge… - European journal of …, 2022 - Wiley Online Library
Cytometric immunophenotyping is a powerful tool to discover and implement T‐cell
biomarkers of type 1 diabetes (T1D) progression and response to clinical therapy. Although …

Scar formation from the perspective of complexity science: a new look at the biological system as a whole

HI Korkmaz, FB Niessen, A Pijpe… - Journal of wound …, 2022 - magonlinelibrary.com
A burn wound is a complex systemic disease at multiple levels. Current knowledge of scar
formation after burn injury has come from traditional biological and clinical studies. These …

Multiplicity of mathematical modeling strategies to search for molecular and cellular insights into bacteria lung infection

M Cantone, G Santos, P Wentker, X Lai… - Frontiers in physiology, 2017 - frontiersin.org
Even today two bacterial lung infections, namely pneumonia and tuberculosis, are among
the 10 most frequent causes of death worldwide. These infections still lack effective …

Age-dependent ventilator-induced lung injury: Mathematical modeling, experimental data, and statistical analysis

Q Hay, C Grubb, S Minucci, MS Valentine… - PLOS Computational …, 2024 - journals.plos.org
A variety of pulmonary insults can prompt the need for life-saving mechanical ventilation;
however, misuse, prolonged use, or an excessive inflammatory response, can result in …

An interactive macrophage signal transduction map facilitates comparative analyses of high-throughput data

P Wentker, M Eberhardt, FS Dreyer… - The Journal of …, 2017 - journals.aai.org
Macrophages (Mϕs) are key players in the coordination of the lifesaving or detrimental
immune response against infections. The mechanistic understanding of the functional …

Mathematical modeling of ventilator-induced lung inflammation

S Minucci, RL Heise, MS Valentine… - Journal of theoretical …, 2021 - Elsevier
Despite the benefits of mechanical ventilators, prolonged or misuse of ventilators may lead
to ventilation-associated/ventilation-induced lung injury (VILI). Lung insults, such as …

Model-based genotype-phenotype mapping used to investigate gene signatures of immune sensitivity and resistance in melanoma micrometastasis

G Santos, S Nikolov, X Lai, M Eberhardt, FS Dreyer… - Scientific reports, 2016 - nature.com
In this paper, we combine kinetic modelling and patient gene expression data analysis to
elucidate biological mechanisms by which melanoma becomes resistant to the immune …