Application of metabolomics in Alzheimer's disease

JM Wilkins, E Trushina - Frontiers in neurology, 2018 - frontiersin.org
Progress toward the development of efficacious therapies for Alzheimer's disease (AD) is
halted by a lack of understanding early underlying pathological mechanisms. Systems …

An introduction to NMR-based approaches for measuring protein dynamics

IR Kleckner, MP Foster - Biochimica et Biophysica Acta (BBA)-Proteins and …, 2011 - Elsevier
Proteins are inherently flexible at ambient temperature. At equilibrium, they are
characterized by a set of conformations that undergo continuous exchange within a …

pH-dependent random coil 1H, 13C, and 15N chemical shifts of the ionizable amino acids: a guide for protein pK a measurements

G Platzer, M Okon, LP McIntosh - Journal of biomolecular NMR, 2014 - Springer
The p K a values and charge states of ionizable residues in polypeptides and proteins are
frequently determined via NMR-monitored pH titrations. To aid the interpretation of the …

Fragment-based drug discovery using NMR spectroscopy

MJ Harner, AO Frank, SW Fesik - Journal of biomolecular NMR, 2013 - Springer
Nuclear magnetic resonance (NMR) spectroscopy has evolved into a powerful tool for
fragment-based drug discovery over the last two decades. While NMR has been traditionally …

BEST-TROSY experiments for time-efficient sequential resonance assignment of large disordered proteins

Z Solyom, M Schwarten, L Geist, R Konrat… - Journal of biomolecular …, 2013 - Springer
The characterization of the conformational properties of intrinsically disordered proteins
(IDPs), and their interaction modes with physiological partners has recently become a major …

Sensitivity enhancement in solution NMR: Emerging ideas and new frontiers

JH Lee, Y Okuno, S Cavagnero - Journal of magnetic resonance, 2014 - Elsevier
Modern NMR spectroscopy has reached an unprecedented level of sophistication in the
determination of biomolecular structure and dynamics at atomic resolution in liquids …

Molecular mechanics

K Vanommeslaeghe, O Guvench - Current pharmaceutical …, 2014 - ingentaconnect.com
Molecular Mechanics (MM) force fields are the methods of choice for protein simulations,
which are essential in the study of conformational flexibility. Given the importance of protein …

NMR approaches for structural analysis of multidomain proteins and complexes in solution

C Göbl, T Madl, B Simon, M Sattler - Progress in Nuclear Magnetic …, 2014 - Elsevier
NMR spectroscopy is a key method for studying the structure and dynamics of (large)
multidomain proteins and complexes in solution. It plays a unique role in integrated …

Novel MS-based approaches and applications in food metabolomics

C Ibáñez, V García-Cañas, A Valdés, C Simó - TrAC Trends in Analytical …, 2013 - Elsevier
This article gives an overview of some of the most recent trends in mass-spectrometry (MS)-
based approaches and their application in food metabolomics. MS is a powerful analytical …

Fast magic‐angle‐spinning NMR reveals the evasive hepatitis B virus capsid C‐terminal domain

M Callon, AA Malär, L Lecoq, M Dujardin… - Angewandte …, 2022 - Wiley Online Library
Experimentally determined protein structures often feature missing domains. One example is
the C‐terminal domain (CTD) of the hepatitis B virus capsid protein, a functionally central …