Copy number variation alters local and global mutational tolerance

G Avecilla, P Spealman, J Matthews, E Caudal… - Genome …, 2023 - genome.cshlp.org
Copy number variants (CNVs), duplications and deletions of genomic sequences, contribute
to evolutionary adaptation but can also confer deleterious effects and cause disease …

Genome-wide screens in yeast models towards understanding chronological lifespan regulation

L Legon, C Rallis - Briefings in Functional Genomics, 2022 - academic.oup.com
Cellular models such as yeasts are a driving force in biogerontology studies. Their simpler
genome, short lifespans and vast genetic and genomics resources make them ideal to …

Revised fission yeast gene and allele nomenclature guidelines for machine readability

M Lera-Ramírez, J Bähler, J Mata, K Rutherford… - Genetics, 2023 - academic.oup.com
Standardized nomenclature for genes, gene products, and isoforms is crucial to prevent
ambiguity and enable clear communication of scientific data, facilitating efficient biocuration …

Native RNA sequencing in fission yeast reveals frequent alternative splicing isoforms

JC Montañés, M Huertas, SG Moro… - Genome …, 2022 - genome.cshlp.org
The unicellular yeast Schizosaccharomyces pombe (fission yeast) retains many of the
splicing features observed in humans and is thus an excellent model to study the basic …

Saturation transposon mutagenesis enables genome-wide identification of genes required for growth and fluconazole resistance in the human fungal pathogen …

RB Billmyre, CJ Craig, J Lyon, C Reichardt… - …, 2024 - pmc.ncbi.nlm.nih.gov
Fungi can cause devastating invasive infections, typically in immunocompromised patients.
Treatment is complicated both by the evolutionary similarity between humans and fungi and …

Functional profiling of long intergenic non-coding RNAs in fission yeast

M Rodriguez-Lopez, S Anver, C Cotobal, S Kamrad… - Elife, 2022 - elifesciences.org
Eukaryotic genomes express numerous long intergenic non-coding RNAs (lincRNAs) that
do not overlap any coding genes. Some lincRNAs function in various aspects of gene …

Genome-wide quantification of contributions to sexual fitness identifies genes required for spore viability and health in fission yeast

RB Billmyre, MT Eickbush, CJ Craig, JJ Lange… - PLoS …, 2022 - journals.plos.org
Numerous genes required for sexual reproduction remain to be identified even in simple
model species like Schizosaccharomyces pombe. To address this, we developed an assay …

mSphere of Influence: When a sequencer is more than a sequencer

RB Billmyre - Msphere, 2024 - journals.asm.org
Blake Billmyre uses functional genomics to help understand the biology of fungal
pathogens, with an emphasis on evolution of virulence relevant traits and drug resistance. In …

Correction: Functional profiling of long intergenic non-coding RNAs in fission yeast

M Rodriguez-Lopez, S Anver, C Cotobal, S Kamrad… - Elife, 2022 - discovery.ucl.ac.uk
Eukaryotic genomes express numerous long intergenic non-coding RNAs (lincRNAs) that
do not overlap any coding genes. Some lincRNAs function in various aspects of gene …

Genome Comparisons of the Fission Yeasts Reveal Ancient Collinear Loci Maintained by Natural Selection

L Acs-Szabo, LA Papp, M Sipiczki, I Miklos - Journal of Fungi, 2021 - mdpi.com
Fission yeasts have a unique life history and exhibit distinct evolutionary patterns from other
yeasts. Besides, the species demonstrate stable genome structures despite the relatively …