Bottom-up coarse-graining: Principles and perspectives

J Jin, AJ Pak, AEP Durumeric, TD Loose… - Journal of chemical …, 2022 - ACS Publications
Large-scale computational molecular models provide scientists a means to investigate the
effect of microscopic details on emergent mesoscopic behavior. Elucidating the relationship …

Mechanical properties of organic semiconductors for stretchable, highly flexible, and mechanically robust electronics

SE Root, S Savagatrup, AD Printz, D Rodriquez… - Chemical …, 2017 - ACS Publications
Mechanical deformability underpins many of the advantages of organic semiconductors. The
mechanical properties of these materials are, however, diverse, and the molecular …

Electrocatalytic synthesis of adipic acid coupled with H2 production enhanced by a ligand modification strategy

Z Li, X Li, H Zhou, Y Xu, SM Xu, Y Ren, Y Yan… - Nature …, 2022 - nature.com
Adipic acid is an important building block of polymers, and is commercially produced by
thermo-catalytic oxidation of ketone-alcohol oil (a mixture of cyclohexanol and …

Modeling and simulations of polymers: a roadmap

TE Gartner III, A Jayaraman - Macromolecules, 2019 - ACS Publications
Molecular modeling and simulations are invaluable tools for the polymer science and
engineering community. These computational approaches enable predictions and provide …

A review of advancements in coarse-grained molecular dynamics simulations

SY Joshi, SA Deshmukh - Molecular Simulation, 2021 - Taylor & Francis
Over the last few years, coarse-grained molecular dynamics has emerged as a way to model
large and complex systems in an efficient and inexpensive manner due to its lowered …

Polymer Adhesion: Seeking New Solutions for an Old Problem#

G Raos, B Zappone - Macromolecules, 2021 - ACS Publications
Polymer adhesion is ubiquitous in both the natural world and human technology. It is also a
complex multiscale phenomenon, such that the solution of adhesion problems requires a …

Perspective on the Martini model

SJ Marrink, DP Tieleman - Chemical Society Reviews, 2013 - pubs.rsc.org
The Martini model, a coarse-grained force field for biomolecular simulations, has found a
broad range of applications since its release a decade ago. Based on a building block …

Improved parameters for the martini coarse-grained protein force field

DH De Jong, G Singh, WFD Bennett… - Journal of chemical …, 2013 - ACS Publications
The Martini coarse-grained force field has been successfully used for simulating a wide
range of (bio) molecular systems. Recent progress in our ability to test the model against …

Machine learning force fields and coarse-grained variables in molecular dynamics: application to materials and biological systems

P Gkeka, G Stoltz, A Barati Farimani… - Journal of chemical …, 2020 - ACS Publications
Machine learning encompasses tools and algorithms that are now becoming popular in
almost all scientific and technological fields. This is true for molecular dynamics as well …

Going backward: a flexible geometric approach to reverse transformation from coarse grained to atomistic models

TA Wassenaar, K Pluhackova… - Journal of chemical …, 2014 - ACS Publications
The conversion of coarse-grained to atomistic models is an important step in obtaining
insight about atomistic scale processes from coarse-grained simulations. For this process …