From the protein's perspective: the benefits and challenges of protein structure-based pharmacophore modeling

MPA Sanders, R McGuire, L Roumen, IJP de Esch… - …, 2012 - pubs.rsc.org
A pharmacophore describes the arrangement of molecular features a ligand must contain to
efficaciously bind a receptor. Pharmacophore models are developed to improve molecular …

DEEPScreen: high performance drug–target interaction prediction with convolutional neural networks using 2-D structural compound representations

AS Rifaioglu, E Nalbat, V Atalay, MJ Martin… - Chemical …, 2020 - pubs.rsc.org
The identification of physical interactions between drug candidate compounds and target
biomolecules is an important process in drug discovery. Since conventional screening …

Fragment-based drug discovery and molecular docking in drug design

T Wang, MB Wu, ZJ Chen, H Chen… - Current …, 2015 - ingentaconnect.com
Fragment-based drug discovery (FBDD) has caused a revolution in the process of drug
discovery and design, with many FBDD leads being developed into clinical trials or …

[HTML][HTML] Physicochemical characterisation, molecular docking, and drug-likeness evaluation of hypotensive peptides encrypted in flaxseed proteome

D Ji, M Xu, CC Udenigwe, D Agyei - Current research in food science, 2020 - Elsevier
In this study, hypotensive peptides derived from mature flaxseed protein sequences were
predicted in silico using BIOPEP-UWM with nine proteases, three each from digestive, plant …

Kinetics and Molecular Docking Studies of the Inhibitions of Angiotensin Converting Enzyme and Renin Activities by Hemp Seed (Cannabis sativa L.) Peptides

AT Girgih, R He, RE Aluko - Journal of agricultural and food …, 2014 - ACS Publications
Four novel peptide sequences (WVYY, WYT, SVYT, and IPAGV) identified from an
enzymatic digest of hemp seed proteins were used for enzyme inhibition kinetics and …

Evaluating molecular mechanism of hypotensive peptides interactions with renin and angiotensin converting enzyme

R He, RE Aluko, XR Ju - PloS one, 2014 - journals.plos.org
Our previous study showed that three rapeseed protein-derived peptides (TF, LY and RALP)
inhibited the in vitro activities of angiotensin converting enzyme (ACE) and renin. Oral …

[HTML][HTML] Pharmacophore modeling, virtual screening, and molecular docking studies for discovery of novel Akt2 inhibitors

J Fei, L Zhou, T Liu, XY Tang - International journal of medical …, 2013 - ncbi.nlm.nih.gov
Akt2 is considered as a potential target for cancer therapy. In order to find novel Akt2
inhibitors which have different scaffolds, structure-based pharmacophore model and 3D …

Development, evaluation and application of 3D QSAR Pharmacophore model in the discovery of potential human renin inhibitors

S John, S Thangapandian, M Arooj, JC Hong… - BMC …, 2011 - Springer
Background Renin has become an attractive target in controlling hypertension because of
the high specificity towards its only substrate, angiotensinogen. The conversion of …

Chemical constituents, pharmacological activities, and uses of common ayurvedic medicinal plants: a future source of new drugs

P Kaushik, P Ahlawat, K Singh, R Singh - Advances in Traditional …, 2023 - Springer
Natural products, especially plants and herbs, have always been a common medicament
source, either as pure active principles or traditional preparations. Traditional medicine has …

Epidemiology and economic burden of measles, mumps, pertussis, and varicella in Germany: a systematic review

O Damm, J Witte, S Wetzka, C Prosser, S Braun… - International Journal of …, 2016 - Springer
Objectives Despite the availability of vaccines and the existence of public vaccination
recommendations, outbreaks of vaccine-preventable childhood diseases still cause public …