Trends in the development of miRNA bioinformatics tools

L Chen, L Heikkinen, C Wang, Y Yang… - Briefings in …, 2019 - academic.oup.com
MicroRNAs (miRNAs) are small noncoding RNAs that regulate gene expression via
recognition of cognate sequences and interference of transcriptional, translational or …

MicroRNAs as potential targets for abiotic stress tolerance in plants

V Shriram, V Kumar, RM Devarumath… - Frontiers in Plant …, 2016 - frontiersin.org
The microRNAs (miRNAs) are small (20–24 nt) sized, non-coding, single stranded
riboregulator RNAs abundant in higher organisms. Recent findings have established that …

Engineering salinity tolerance in plants: progress and prospects

SH Wani, V Kumar, T Khare, R Guddimalli, M Parveda… - Planta, 2020 - Springer
Main conclusion There is a need to integrate conceptual framework based on the current
understanding of salt stress responses with different approaches for manipulating and …

Non-coding RNAs and their roles in stress response in plants

J Wang, X Meng, OB Dobrovolskaya… - Genomics …, 2017 - academic.oup.com
Eukaryotic genomes encode thousands of non-coding RNAs (ncRNAs), which play crucial
roles in transcriptional and post-transcriptional regulation of gene expression. Accumulating …

A multi-omic Nicotiana benthamiana resource for fundamental research and biotechnology

B Ranawaka, J An, MT Lorenc, H Jung, M Sulli… - Nature Plants, 2023 - nature.com
Nicotiana benthamiana is an invaluable model plant and biotechnology platform with a~ 3
Gb allotetraploid genome. To further improve its usefulness and versatility, we have …

Regulatory role of microRNAs (miRNAs) in the recent development of abiotic stress tolerance of plants

Y Begum - Gene, 2022 - Elsevier
MicroRNAs (miRNAs) are a distinct groups of single-stranded non-coding, tiny regulatory
RNAs approximately 20–24 nucleotides in length. miRNAs negatively influence gene …

miRNA applications for engineering abiotic stress tolerance in plants

SH Wani, V Kumar, T Khare, P Tripathi, T Shah… - Biologia, 2020 - Springer
MicroRNAs (miRNAs) are endogenous, tiny RNA molecules that sit at the heart of regulating
gene expression in numerous developmental and signaling pathways. Recent …

Transcriptional memory contributes to drought tolerance in coffee (Coffea canephora) plants

FA de Freitas Guedes, P Nobres, DCR Ferreira… - Environmental and …, 2018 - Elsevier
Water deprivation is an important limiting factor in the productivity of crops like coffee. In
addition to transcription factors (TFs) and small non-coding RNAs, transcriptional memory …

Biogenesis, functions, interactions, and resources of non-coding RNAs in plants

H Chao, Y Hu, L Zhao, S Xin, Q Ni, P Zhang… - International Journal of …, 2022 - mdpi.com
Plant transcriptomes encompass a large number of functional non-coding RNAs (ncRNAs),
only some of which have protein-coding capacity. Since their initial discovery, ncRNAs have …

ASRmiRNA: Abiotic Stress-Responsive miRNA Prediction in Plants by Using Machine Learning Algorithms with Pseudo K-Tuple Nucleotide Compositional Features

PK Meher, S Begam, TK Sahu, A Gupta… - International Journal of …, 2022 - mdpi.com
MicroRNAs (miRNAs) play a significant role in plant response to different abiotic stresses.
Thus, identification of abiotic stress-responsive miRNAs holds immense importance in crop …