The natural history of group I introns

P Haugen, DM Simon, D Bhattacharya - TRENDS in Genetics, 2005 - cell.com
There are four major classes of introns: self-splicing group I and group II introns, tRNA
and/or archaeal introns and spliceosomal introns in nuclear pre-mRNA. Group I introns are …

Homing endonucleases: DNA scissors on a mission

M Hafez, G Hausner - Genome, 2012 - cdnsciencepub.com
Buried within the genomes of many microorganisms are genetic elements that encode rare-
cutting homing endonucleases that assist in the mobility of the elements that encode them …

The coevolution of fungal mitochondrial introns and their homing endonucleases (GIY-YIG and LAGLIDADG)

AH Megarioti, VN Kouvelis - Genome biology and evolution, 2020 - academic.oup.com
Fungal mitochondrial (mt) genomes exhibit great diversity in size which is partially attributed
to their variable intergenic regions and most importantly to the inclusion of introns within …

Putative cross-kingdom horizontal gene transfer in sponge (Porifera) mitochondria

C Rot, I Goldfarb, M Ilan, D Huchon - BMC evolutionary biology, 2006 - Springer
Background The mitochondrial genome of Metazoa is usually a compact molecule without
introns. Exceptions to this rule have been reported only in corals and sea anemones …

Mobile elements and mitochondrial genome expansion in the soil fungus and potato pathogen Rhizoctonia solani AG-3

L Losada, SB Pakala, ND Fedorova… - FEMS microbiology …, 2014 - academic.oup.com
The soil fungus Rhizoctonia solani is an economically important pathogen of agricultural
and forestry crops. Here, we present the complete sequence and analysis of the …

Identification of conserved regions in the plastid genome: implications for DNA barcoding and biological function

GG Presting - Botany, 2006 - cdnsciencepub.com
All oligonucleotides of the sugarcane chloroplast genome that are conserved in one or more
of 36 other completed plastid genomes have been identified by computer-assisted …

The mitochondrial genome of Endoconidiophora resinifera is intron rich

A Zubaer, A Wai, G Hausner - Scientific reports, 2018 - nature.com
Endoconidiophora resinifera (= Ceratocystis resinifera) is a blue-stain fungus that occurs on
conifers. The data showed that the Endoconidiophora resinifera mitochondrial genome is …

Genes within Genes: Multiple LAGLIDADG Homing Endonucleases Target the Ribosomal Protein S3 Gene Encoded within an rnl Group I Intron of Ophiostoma and …

J Sethuraman, A Majer, NC Friedrich… - Molecular biology …, 2009 - academic.oup.com
In some ascomycete fungi, ribosomal protein S3 (Rps3) is encoded within a group I intron
(mL2449) that is inserted in the U11 region of the mitochondrial large subunit rDNA (rnl) …

Evolution of group I introns in Porifera: new evidence for intron mobility and implications for DNA barcoding

A Schuster, JV Lopez, LE Becking, M Kelly… - BMC evolutionary …, 2017 - Springer
Background Mitochondrial introns intermit coding regions of genes and feature characteristic
secondary structures and splicing mechanisms. In metazoans, mitochondrial introns have …

Horizontal transfer and gene conversion as an important driving force in shaping the landscape of mitochondrial introns

B Wu, W Hao - G3: Genes, Genomes, Genetics, 2014 - academic.oup.com
Group I introns are highly dynamic and mobile, featuring extensive presence-absence
variation and widespread horizontal transfer. Group I introns can invade intron-lacking …