Deformable medical image registration: A survey

A Sotiras, C Davatzikos… - IEEE transactions on …, 2013 - ieeexplore.ieee.org
Deformable image registration is a fundamental task in medical image processing. Among
its most important applications, one may cite: 1) multi-modality fusion, where information …

A multiscale analysis of early flower development in Arabidopsis provides an integrated view of molecular regulation and growth control

Y Refahi, A Zardilis, G Michelin, R Wightman… - Developmental Cell, 2021 - cell.com
We have analyzed the link between the gene regulation and growth during the early stages
of flower development in Arabidopsis. Starting from time-lapse images, we generated a 4D …

Segmentation of organs‐at‐risks in head and neck CT images using convolutional neural networks

B Ibragimov, L Xing - Medical physics, 2017 - Wiley Online Library
Purpose Accurate segmentation of organs‐at‐risks (OAR s) is the key step for efficient
planning of radiation therapy for head and neck (HaN) cancer treatment. In the work, we …

A registration-based propagation framework for automatic whole heart segmentation of cardiac MRI

X Zhuang, KS Rhode, RS Razavi… - IEEE transactions on …, 2010 - ieeexplore.ieee.org
Magnetic resonance (MR) imaging has become a routine modality for the determination of
patient cardiac morphology. The extraction of this information can be important for the …

Evaluation of an atlas-based automatic segmentation software for the delineation of brain organs at risk in a radiation therapy clinical context

A Isambert, F Dhermain, F Bidault… - Radiotherapy and …, 2008 - Elsevier
BACKGROUND AND PURPOSE: Conformal radiation therapy techniques require the
delineation of volumes of interest, a time-consuming and operator-dependent task. In this …

A fast and log-euclidean polyaffine framework for locally linear registration

V Arsigny, O Commowick, N Ayache… - Journal of Mathematical …, 2009 - Springer
In this article, we focus on the parameterization of non-rigid geometrical deformations with a
small number of flexible degrees of freedom. In previous work, we proposed a general …

Estimation of slipping organ motion by registration with direction-dependent regularization

A Schmidt-Richberg, R Werner, H Handels… - Medical image …, 2012 - Elsevier
Accurate estimation of respiratory motion is essential for many applications in medical 4D
imaging, for example for radiotherapy of thoracic and abdominal tumors. It is usually done by …

A pre-clinical assessment of an atlas-based automatic segmentation tool for the head and neck

R Sims, A Isambert, V Grégoire, F Bidault… - Radiotherapy and …, 2009 - Elsevier
BACKGROUND AND PURPOSE: Accurate conformal radiotherapy treatment requires
manual delineation of target volumes and organs at risk (OAR) that is both time-consuming …

Atlas-based whole-body segmentation of mice from low-contrast Micro-CT data

M Baiker, J Milles, J Dijkstra, TD Henning… - Medical image …, 2010 - Elsevier
This paper presents a fully automated method for atlas-based whole-body segmentation in
non-contrast-enhanced Micro-CT data of mice. The position and posture of mice in such …

An automatic segmentation of T2-FLAIR multiple sclerosis lesions

JC Souplet, C Lebrun, N Ayache… - … -Multiple sclerosis lesion …, 2008 - inria.hal.science
Multiple sclerosis diagnosis and patient follow-up can be helped by an evaluation of the
lesion load in MRI sequences. A lot of automatic methods to segment these lesions are …