Application of machine learning in bacteriophage research
Phages are one of the key components in the structure, dynamics, and interactions of
microbial communities in different bins. It has a clear impact on human health and the food …
microbial communities in different bins. It has a clear impact on human health and the food …
Integrative systems biology analysis elucidates mastitis disease underlying functional modules in dairy cattle
Background: Mastitis is the most prevalent disease in dairy cattle and one of the most
significant bovine pathologies affecting milk production, animal health, and reproduction. In …
significant bovine pathologies affecting milk production, animal health, and reproduction. In …
Identification of potentially functional modules and diagnostic genes related to amyotrophic lateral sclerosis based on the WGCNA and LASSO algorithms
N Daneshafrooz, M Bagherzadeh Cham, M Majidi… - Scientific Reports, 2022 - nature.com
Amyotrophic lateral sclerosis (ALS) is a genetically and phenotypically heterogeneous
disease results in the loss of motor neurons. Mounting information points to involvement of …
disease results in the loss of motor neurons. Mounting information points to involvement of …
Identification of the real hub gene and construction of a novel prognostic signature for pancreatic adenocarcinoma based on the weighted gene Co-expression …
Q Yuan, J Ren, Z Wang, L Ji, D Deng, D Shang - Frontiers in genetics, 2021 - frontiersin.org
Background: Pancreatic adenocarcinoma (PAAD) has a considerably bad prognosis, and its
pathophysiologic mechanism remains unclear. Thus, we aimed to identify real hub genes to …
pathophysiologic mechanism remains unclear. Thus, we aimed to identify real hub genes to …
Global transcriptome analysis identifies critical functional modules associated with multiple abiotic stress responses in microalgae Chromochloris zofingiensis
B Panahi - Plos one, 2024 - journals.plos.org
In the current study, systems biology approach was applied to get a deep insight regarding
the regulatory mechanisms of Chromochloris zofingiensis under overall stress conditions …
the regulatory mechanisms of Chromochloris zofingiensis under overall stress conditions …
Global transcriptome and coexpression network analyses reveal new insights into somatic embryogenesis in hybrid sweetgum (Liquidambar styraciflua× Liquidambar …
S Qi, R Zhao, J Yan, Y Fan, C Huang, H Li… - Frontiers in Plant …, 2021 - frontiersin.org
Somatic embryogenesis (SE) is a process of somatic cells that dedifferentiate to totipotent
embryonic stem cells and generate embryos in vitro. Despite recent scientific headway in …
embryonic stem cells and generate embryos in vitro. Despite recent scientific headway in …
Integrative multiomics in the lung reveals a protective role of Asporin in pulmonary arterial hypertension
J Hong, L Medzikovic, W Sun, B Wong, G Ruffenach… - Circulation, 2024 - ahajournals.org
BACKGROUND: Integrative multiomics can elucidate pulmonary arterial hypertension (PAH)
pathobiology, but procuring human PAH lung samples is rare. METHODS: We leveraged …
pathobiology, but procuring human PAH lung samples is rare. METHODS: We leveraged …
[HTML][HTML] Navigating the barley grain quality and nutrition maze through systems seed biology
B Panahi, HM Jalaly - Journal of Agriculture and Food Research, 2024 - Elsevier
Barley is one of the most widely consumed cereals in the world. It is a valuable source of
protein, carbohydrate, and micronutrient fortification in human diets. The integration of …
protein, carbohydrate, and micronutrient fortification in human diets. The integration of …
Weighted gene co-expression network analysis revealed the key pathways and hub genes of potassium regulating cotton root adaptation to salt stress
F Ju, L Sun, C Xiong, Z Wang, H Yu, J Pang… - Frontiers in Plant …, 2023 - frontiersin.org
Soil salinization is one of the main abiotic stresses affecting cotton yield and planting area.
Potassium application has been proven to be an important strategy to reduce salt damage in …
Potassium application has been proven to be an important strategy to reduce salt damage in …
Transcriptome analysis reveals the proline metabolic pathway and its potential regulation TF-hub genes in salt-stressed potato
Q Jing, H Hou, X Meng, A Chen, L Wang… - Frontiers in plant …, 2022 - frontiersin.org
Potato (Solanum tuberosum) is currently the third most important food crop in the world.
However, the production of potato is seriously threatened by salt stress, which often occurs …
However, the production of potato is seriously threatened by salt stress, which often occurs …