Understanding fibrosis pathogenesis via modeling macrophage-fibroblast interplay in immune-metabolic context

E Setten, A Castagna, JM Nava-Sedeño… - Nature …, 2022 - nature.com
Fibrosis is a progressive biological condition, leading to organ dysfunction in various clinical
settings. Although fibroblasts and macrophages are known as key cellular players for …

End-to-end affine registration framework for histopathological images with weak annotations

Y Lin, Z Liang, Y He, W Huang, T Guan - Computer Methods and Programs …, 2023 - Elsevier
Abstract Background and Objective Histopathological image registration is an essential
component in digital pathology and biomedical image analysis. Deep-learning-based …

A deep learning method for automatic evaluation of diagnostic information from multi-stained histopathological images

J Ji, T Wan, D Chen, H Wang, M Zheng, Z Qin - Knowledge-Based Systems, 2022 - Elsevier
Manual screening of large-scale histopathological images is an extremely time-consuming,
laborious and subjective procedure. Accurate evaluation of diagnostic information from multi …

HistoStarGAN: A unified approach to stain normalisation, stain transfer and stain invariant segmentation in renal histopathology

J Vasiljević, F Feuerhake, C Wemmert… - Knowledge-Based …, 2023 - Elsevier
Virtual stain transfer is a promising area of research in Computational Pathology, which has
a great potential to alleviate important limitations when applying deep-learning-based …

Robust Renal Pathology Classification through Deep Learning Architectures

NA Yaligar, VP Baligar, M Akki - 2024 Second International …, 2024 - ieeexplore.ieee.org
The kidneys, often overlooked yet vital for bodily equilibrium, serve a multifaceted role
beyond filtration, governing crucial regulatory functions necessary for sustaining life. They …

Data augmentation based on spatial deformations for histopathology: An evaluation in the context of glomeruli segmentation

F Allender, R Allègre, C Wemmert… - Computer Methods and …, 2022 - Elsevier
Abstract Background and Objective The effective application of deep learning to digital
histopathology is hampered by the shortage of high-quality annotated images. In this paper …

Conditional image synthesis for improved segmentation of glomeruli in renal histopathological images

F Allender, R Allégre, C Wemmert… - 2022 IEEE-EMBS …, 2022 - ieeexplore.ieee.org
In a context of limited data availability, we consider the supervised segmentation of
glomerular structures in patches of renal histopathological whole slide images. These …

[PDF][PDF] Modeling the relevance of immune and metabolic cues in the macrophage/fibroblast interplay during fibrosis

E Setten, A Castagna, J Nava-Sedeno, J Weber… - 2021 - hatzikirou.gr
Fibrosis is a progressive biological process leading to organ dysfunction in different clinical
settings. As fibroblasts and macrophages are known as key cellular players for fibrosis …

[PDF][PDF] AI-assisted annotation of large and multimodal imaging datasets

S Bernard - 2021 - matheo.uliege.be
The annotation of histological images through different stains is an important task for
diagnosis of diseases such as cancer, but it is also very time-consuming. Despite its …

Techniques for Staining Histological Sections to Identify the Microstructural Characteristics of Food Products

L Rudneva, K Tararova, N Motina - … and Applied Scientific Research in the …, 2021 - Springer
Microstructural studies of raw meat and products are becoming more and more popular and
informative methods for studying the composition and quality of meat. Histological studies …