Generative molecular design for drug discovery and development has seen a recent resurgence promising to improve the efficiency of the design-make-test-analyse cycle; by …
The ability of atomic interaction parameters generated using the Automated Topology Builder and Repository version 3.0 (ATB3. 0) to predict experimental hydration free …
To test and validate the Automated force field Topology Builder and Repository (ATB; http://compbio. biosci. uq. edu. au/atb/) the hydration free enthalpies for a set of 214 drug-like …
Z Zhang, Q Liu - International Conference on Machine …, 2023 - proceedings.mlr.press
Generating molecules with high binding affinities to target proteins (aka structure-based drug design) is a fundamental and challenging task in drug discovery. Recently, deep …
RS Bohacek, C McMartin, WC Guida - Medicinal research reviews, 1996 - azevedolab.net
The conceptual basis for structure-based drug design was formulated 100 years ago by Emil Fischer. 1 His" lock and key" hypothesis is a constantly recurring leitmotif in modern drug …
F Ahmed, IS Kang, KH Kim, A Asif… - Journal of Medical …, 2023 - Wiley Online Library
Cancer management is major concern of health organizations and viral cancers account for approximately 15.4% of all known human cancers. Due to large number of patients, efficient …
AC Anderson - Chemistry & biology, 2003 - cell.com
The field of structure-based drug design is a rapidly growing area in which many successes have occurred in recent years. The explosion of genomic, proteomic, and structural …
R Wang, L Lai, S Wang - Journal of computer-aided molecular design, 2002 - Springer
New empirical scoring functions have been developed to estimate the binding affinity of a given protein-ligand complex with known three-dimensional structure. These scoring …
R Wang, X Fang, Y Lu, CY Yang… - Journal of medicinal …, 2005 - ACS Publications
We have developed the PDBbind database to provide a comprehensive collection of binding affinities for the protein− ligand complexes in the Protein Data Bank (PDB). This …