Recent advances in high‐throughput experimental techniques have led to an exponential
increase in both the size and the complexity of the data sets commonly studied in biology …

Sampling is a widely used graph reduction technique to accelerate graph computations and
simplify graph visualizations. By comprehensively analyzing the literature on graph …

Time is of the essence in biology as in so much else. For example, monitoring disease
progression or the timing of developmental defects is important for the processes of drug …

This paper presents Abstractocyte, a system for the visual analysis of astrocytes and their
relation to neurons, in nanoscale volumes of brain tissue. Astrocytes are glial cells, ie, non …

Background Understanding living systems is crucial for curing diseases. To achieve this task
we have to understand biological networks based on protein-protein interactions …

Background Molecular and systems biologists are tasked with the comprehension and
analysis of incredibly complex networks of biochemical interactions, called pathways, that …

Biological pathway maps are highly relevant tools for many tasks in molecular biology. They
reduce the complexity of the overall biological network by partitioning it into smaller …

Biological networks describe complex relationships in biological systems, which represent
biological entities as vertices and their underlying connectivity as edges. Ideally, for a …

Interactive visual analysis of biological high-throughput data in the context of the underlying
networks is an essential task in modern biomedicine with applications ranging from …

The basic processes that bring about living systems are conventionally represented in the
framework of chemical reaction networks. Recently, it has been proposed that this …