The scales, mechanisms, and dynamics of the genome architecture

L Lizana, YB Schwartz - Science Advances, 2024 - science.org
Even when split into several chromosomes, DNA molecules that make up our genome are
too long to fit into the cell nuclei unless massively folded. Such folding must accommodate …

Chromatin remodellers as therapeutic targets

HA Malone, CWM Roberts - Nature Reviews Drug Discovery, 2024 - nature.com
Large-scale cancer genome sequencing studies have revealed that chromatin regulators
are frequently mutated in cancer. In particular, more than 20% of cancers harbour mutations …

Interpretable deep residual network uncovers nucleosome positioning and associated features

Y Masoudi-Sobhanzadeh, S Li, Y Peng… - Nucleic Acids …, 2024 - academic.oup.com
Nucleosomes represent elementary building units of eukaryotic chromosomes and consist of
DNA wrapped around a histone octamer flanked by linker DNA segments. Nucleosomes are …

To slide or not to slide: key role of the hexasome in chromatin remodeling revealed

D Rhodes - Nature Structural & Molecular Biology, 2024 - nature.com
Hexasomes are non-canonical nucleosomes that package DNA with six instead of eight
histones. First discovered 40 years ago as a consequence of transcription, two near-atomic …

Mitochondrial dysfunction, a weakest link of network of aging, relation to innate intramitochondrial immunity of DNA recognition receptors

DX Tan - Mitochondrion, 2024 - Elsevier
Aging probably is the most complexed process in biology. It is manifested by a variety of
hallmarks. These hallmarks weave a network of aging; however, each hallmark is not …

[HTML][HTML] Metabolic enzymes aldo-2 and pdhb-1 as potential epigenetic regulators during C. elegans embryogenesis

S Ravanelli, JYC Park, C Wicky, CY Ewald… - microPublication …, 2024 - ncbi.nlm.nih.gov
The intersection of metabolic processes and epigenetic regulation during embryogenesis is
crucial yet not fully understood. Through a candidate RNAi screen in Caenorhabditis …

Transcriptional activation domains interact with ATPase subunits of yeast chromatin remodelling complexes SWI/SNF, RSC and INO80

EC Wendegatz, M Engelhardt, HJ Schüller - Current Genetics, 2024 - Springer
Chromatin remodelling complexes (CRC) are ATP-dependent molecular machines
important for the dynamic organization of nucleosomes along eukaryotic DNA. CRCs …

Chromatin remodelers: a concise introduction for biophysicists

S Klempahn, H Schiessel, R Blossey - Biophysical Reviews, 2024 - Springer
Chromatin remodelers are molecular motors that act on nucleosomes: they move them
along DNA or (dis-) assemble them. Despite the fact that they perform essential regulatory …

Histone H2A variants play a key role at DNA double-strand breaks during repair pathway choice

E Clerf, M Galloy, A Fradet-Turcotte… - Frontiers in Epigenetics …, 2024 - frontiersin.org
Histone post-translational modifications and variants play crucial roles in the adaptability of
chromatin structure, facilitating rapid responses necessary for biological processes such as …

Structures of H2A. Z-associated human chromatin remodelers SRCAP and TIP60 reveal divergent mechanisms of chromatin engagement

G Park, AB Patel, C Wu, RK Louder - bioRxiv, 2024 - biorxiv.org
H2A. Z is a conserved histone variant that is localized to specific genomic regions where it
plays important roles in transcription, DNA repair, and replication. Central to the …