Innovations in genomic antimicrobial resistance surveillance
NE Wheeler, V Price, E Cunningham-Oakes… - The Lancet …, 2023 - thelancet.com
Whole-genome sequencing of antimicrobial-resistant pathogens is increasingly being used
for antimicrobial resistance (AMR) surveillance, particularly in high-income countries …
for antimicrobial resistance (AMR) surveillance, particularly in high-income countries …
Clinical Diagnostics of Bacterial Infections and Their Resistance to Antibiotics—Current State and Whole Genome Sequencing Implementation Perspectives
Antimicrobial resistance (AMR), defined as the ability of microorganisms to withstand
antimicrobial treatment, is responsible for millions of deaths annually. The rapid spread of …
antimicrobial treatment, is responsible for millions of deaths annually. The rapid spread of …
A comprehensive review on genomics, systems biology and structural biology approaches for combating antimicrobial resistance in ESKAPE pathogens …
In recent decades, antimicrobial resistance has been augmented as a global concern to
public health owing to the global spread of multidrug-resistant strains from different ESKAPE …
public health owing to the global spread of multidrug-resistant strains from different ESKAPE …
Hybrid Assembly Provides Improved Resolution of Plasmids, Antimicrobial Resistance Genes, and Virulence Factors in Escherichia coli and Klebsiella pneumoniae …
Emerging new sequencing technologies have provided researchers with a unique
opportunity to study factors related to microbial pathogenicity, such as antimicrobial …
opportunity to study factors related to microbial pathogenicity, such as antimicrobial …
The population genomics of increased virulence and antibiotic resistance in human commensal Escherichia coli over 30 years in France
Escherichia coli is a commensal species of the lower intestine but is also a major pathogen
causing intestinal and extraintestinal infections that is increasingly prevalent and resistant to …
causing intestinal and extraintestinal infections that is increasingly prevalent and resistant to …
Highly sensitive quantitative phase microscopy and deep learning aided with whole genome sequencing for rapid detection of infection and antimicrobial resistance
Current state-of-the-art infection and antimicrobial resistance (AMR) diagnostics are based
on culture-based methods with a detection time of 48–96 h. Therefore, it is essential to …
on culture-based methods with a detection time of 48–96 h. Therefore, it is essential to …
Ultrafast and cost-effective pathogen identification and resistance gene detection in a clinical setting using nanopore flongle sequencing
E Avershina, SA Frye, J Ali, AM Taxt… - Frontiers in …, 2022 - frontiersin.org
Rapid bacterial identification and antimicrobial resistance gene (ARG) detection are crucial
for fast optimization of antibiotic treatment, especially for septic patients where each hour of …
for fast optimization of antibiotic treatment, especially for septic patients where each hour of …
Molecular Epidemiology and Colistin-Resistant Mechanism of mcr-Positive and mcr-Negative Escherichia coli Isolated From Animal in Sichuan Province, China
F Li, P Cheng, X Li, R Liu, H Liu, X Zhang - Frontiers in Microbiology, 2022 - frontiersin.org
Colistin is the last line of defense for the treatment of multidrug-resistant gram-negative
bacterial infections. However, colistin resistance is gradually increasing worldwide, with …
bacterial infections. However, colistin resistance is gradually increasing worldwide, with …
Effect of cattle farm exposure on oropharyngeal and gut microbial communities and antibiotic resistance genes in workers
D Ding, J Zhu, Y Gao, F Yang, Y Ma, X Cheng… - Science of the Total …, 2022 - Elsevier
Livestock farms are recognized as the main sources of antibiotic resistance genes (ARGs)
and antibiotic-resistant bacteria (ARB) with potential implications for human health. In this …
and antibiotic-resistant bacteria (ARB) with potential implications for human health. In this …
Profiling the Virulence and Antibiotic Resistance Genes of Cronobacter sakazakii Strains Isolated From Powdered and Dairy Formulas by Whole-Genome …
J Parra-Flores, O Holý, F Riffo, S Lepuschitz… - Frontiers in …, 2021 - frontiersin.org
Cronobacter sakazakii is an enteropathogen that causes neonatal meningitis, septicemia,
and necrotizing enterocolitis in preterm infants and newborns with a mortality rate of 15 to …
and necrotizing enterocolitis in preterm infants and newborns with a mortality rate of 15 to …