Assessing and tuning brain decoders: cross-validation, caveats, and guidelines

G Varoquaux, PR Raamana, DA Engemann… - NeuroImage, 2017 - Elsevier
Decoding, ie prediction from brain images or signals, calls for empirical evaluation of its
predictive power. Such evaluation is achieved via cross-validation, a method also used to …

Sample-size determination methodologies for machine learning in medical imaging research: a systematic review

I Balki, A Amirabadi, J Levman… - Canadian …, 2019 - journals.sagepub.com
Purpose The required training sample size for a particular machine learning (ML) model
applied to medical imaging data is often unknown. The purpose of this study was to provide …

Effective feature learning and fusion of multimodality data using stage‐wise deep neural network for dementia diagnosis

T Zhou, KH Thung, X Zhu, D Shen - Human brain mapping, 2019 - Wiley Online Library
In this article, the authors aim to maximally utilize multimodality neuroimaging and genetic
data for identifying Alzheimer's disease (AD) and its prodromal status, Mild Cognitive …

PRoNTo: pattern recognition for neuroimaging toolbox

J Schrouff, MJ Rosa, JM Rondina, AF Marquand… - Neuroinformatics, 2013 - Springer
In the past years, mass univariate statistical analyses of neuroimaging data have been
complemented by the use of multivariate pattern analyses, especially based on machine …

Multivariate lesion‐symptom mapping using support vector regression

Y Zhang, DY Kimberg, HB Coslett… - Human brain …, 2014 - Wiley Online Library
Lesion analysis is a classic approach to study brain functions. Because brain function is a
result of coherent activations of a collection of functionally related voxels, lesion‐symptom …

Toward a unified framework for interpreting machine-learning models in neuroimaging

L Kohoutová, J Heo, S Cha, S Lee, T Moon… - Nature protocols, 2020 - nature.com
Abstract Machine learning is a powerful tool for creating computational models relating brain
function to behavior, and its use is becoming widespread in neuroscience. However, these …

Simultaneous feature selection and discretization based on mutual information

S Sharmin, M Shoyaib, AA Ali, MAH Khan, O Chae - Pattern Recognition, 2019 - Elsevier
Recently mutual information based feature selection criteria have gained popularity for their
superior performances in different applications of pattern recognition and machine learning …

On the stability of canonical correlation analysis and partial least squares with application to brain-behavior associations

M Helmer, S Warrington… - Communications …, 2024 - nature.com
Associations between datasets can be discovered through multivariate methods like
Canonical Correlation Analysis (CCA) or Partial Least Squares (PLS). A requisite property …

[HTML][HTML] Sparse network-based models for patient classification using fMRI

MJ Rosa, L Portugal, T Hahn, AJ Fallgatter, MI Garrido… - Neuroimage, 2015 - Elsevier
Pattern recognition applied to whole-brain neuroimaging data, such as functional Magnetic
Resonance Imaging (fMRI), has proved successful at discriminating psychiatric patients from …

Towards algorithmic analytics for large-scale datasets

D Bzdok, TE Nichols, SM Smith - Nature Machine Intelligence, 2019 - nature.com
The traditional goal of quantitative analytics is to find simple, transparent models that
generate explainable insights. In recent years, large-scale data acquisition enabled, for …