Tribbles in the 21st century: the evolving roles of tribbles pseudokinases in biology and disease

PA Eyers, K Keeshan, N Kannan - Trends in cell biology, 2017 - cell.com
The Tribbles (TRIB) pseudokinases control multiple aspects of eukaryotic cell biology and
evolved unique features distinguishing them from all other protein kinases. The atypical …

[HTML][HTML] Understanding protein–drug interactions using ion mobility–mass spectrometry

CE Eyers, M Vonderach, S Ferries, K Jeacock… - Current opinion in …, 2018 - Elsevier
Ion mobility–mass spectrometry (IM–MS) is an important addition to the analytical toolbox for
the structural evaluation of proteins, and is enhancing many areas of biophysical analysis …

Aurora A regulation by reversible cysteine oxidation reveals evolutionarily conserved redox control of Ser/Thr protein kinase activity

DP Byrne, S Shrestha, M Galler, M Cao, LA Daly… - Science …, 2020 - science.org
Reactive oxygen species (ROS) are physiological mediators of cellular signaling and play
potentially damaging roles in human diseases. In this study, we found that the catalytic …

Tracing the origin and evolution of pseudokinases across the tree of life

A Kwon, S Scott, R Taujale, W Yeung, KJ Kochut… - Science …, 2019 - science.org
Protein phosphorylation by eukaryotic protein kinases (ePKs) is a fundamental mechanism
of cell signaling in all organisms. In model vertebrates,~ 10% of ePKs are classified as …

Custom workflow for the confident identification of sulfotyrosine-containing peptides and their discrimination from phosphopeptides

LA Daly, DP Byrne, S Perkins… - Journal of Proteome …, 2023 - ACS Publications
Protein tyrosine sulfation (sY) is a post-translational modification (PTM) catalyzed by Golgi-
resident tyrosyl protein sulfo transferases (TPSTs). Information on sY in humans is currently …

cAMP-dependent protein kinase (PKA) complexes probed by complementary differential scanning fluorimetry and ion mobility–mass spectrometry

DP Byrne, M Vonderach, S Ferries… - Biochemical …, 2016 - portlandpress.com
cAMP-dependent protein kinase (PKA) is an archetypal biological signaling module and a
model for understanding the regulation of protein kinases. In the present study, we combine …

Cataloguing the dead: breathing new life into pseudokinase research

S Shrestha, DP Byrne, JA Harris, N Kannan… - The FEBS …, 2020 - Wiley Online Library
Pseudoenzymes are present within many, but not all, known enzyme families and lack one
or more conserved canonical amino acids that help define their catalytically active …

Evolution of functional diversity in the holozoan tyrosine kinome

W Yeung, A Kwon, R Taujale, C Bunn… - Molecular Biology …, 2021 - academic.oup.com
The emergence of multicellularity is strongly correlated with the expansion of tyrosine
kinases, a conserved family of signaling enzymes that regulates pathways essential for cell …

Potts Hamiltonian Models and Molecular Dynamics Free Energy Simulations for Predicting the Impact of Mutations on Protein Kinase Stability

A Thakur, J Gizzio, RM Levy - The Journal of Physical Chemistry …, 2024 - ACS Publications
Single-point mutations in kinase proteins can affect their stability and fitness, and
computational analysis of these effects can provide insights into the relationships among …

A resource for exploring the understudied human kinome for research and therapeutic opportunities

N Moret, C Liu, BM Gyori, JA Bachman, A Steppi… - BioRxiv, 2020 - biorxiv.org
The functions of protein kinases have been widely studied and over 60 kinase inhibitors are
FDA-approved drugs. Membership in the human kinome is nonetheless subject to multiple …