[HTML][HTML] A genome sequencing system for universal newborn screening, diagnosis, and precision medicine for severe genetic diseases

SF Kingsmore, LD Smith, CM Kunard… - The American Journal of …, 2022 - cell.com
Newborn screening (NBS) dramatically improves outcomes in severe childhood disorders
by treatment before symptom onset. In many genetic diseases, however, outcomes remain …

Applications of artificial intelligence in clinical laboratory genomics

S Aradhya, FM Facio, H Metz, T Manders… - American Journal of …, 2023 - Wiley Online Library
The transition from analog to digital technologies in clinical laboratory genomics is ushering
in an era of “big data” in ways that will exceed human capacity to rapidly and reproducibly …

The landscape of reported VUS in multi-gene panel and genomic testing: Time for a change

HL Rehm, JT Alaimo, S Aradhya, P Bayrak-Toydemir… - Genetics in …, 2023 - Elsevier
Purpose Variants of uncertain significance (VUS) are a common result of diagnostic genetic
testing and can be difficult to manage with potential misinterpretation and downstream costs …

Perspectives of rare disease experts on newborn genome sequencing

NB Gold, SM Adelson, N Shah, S Williams… - JAMA network …, 2023 - jamanetwork.com
Importance Newborn genome sequencing (NBSeq) can detect infants at risk for treatable
disorders currently undetected by conventional newborn screening. Despite broad …

Efficient mapping of accurate long reads in minimizer space with mapquik

B Ekim, K Sahlin, P Medvedev, B Berger… - Genome …, 2023 - genome.cshlp.org
DNA sequencing data continue to progress toward longer reads with increasingly lower
sequencing error rates. We focus on the critical problem of mapping, or aligning, low …

Reclassification of the etiology of infant mortality with whole-genome sequencing

MJ Owen, MS Wright, S Batalov, Y Kwon… - JAMA network …, 2023 - jamanetwork.com
Importance Understanding the causes of infant mortality shapes public health, surveillance,
and research investments. However, the association of single-locus (mendelian) genetic …

Precision medicine in rare diseases: What is next?

B Tesi, C Boileau, KM Boycott… - Journal of Internal …, 2023 - Wiley Online Library
Molecular diagnostics is a cornerstone of modern precision medicine, broadly understood
as tailoring an individual's treatment, follow‐up, and care based on molecular data. In rare …

Rapid whole-genomic sequencing and a targeted neonatal gene panel in infants with a suspected genetic disorder

JL Maron, S Kingsmore, BD Gelb, J Vockley, K Wigby… - Jama, 2023 - jamanetwork.com
Importance Genomic testing in infancy guides medical decisions and can improve health
outcomes. However, it is unclear whether genomic sequencing or a targeted neonatal gene …

Whole‐genome sequencing holds the key to the success of gene‐targeted therapies

J Vockley, A Aartsma‐Rus, JL Cohen… - American Journal of …, 2023 - Wiley Online Library
Rare genetic disorders affect as many as 3%–5% of all babies born. Approximately 10,000
such disorders have been identified or hypothesized to exist. Treatment is supportive except …

Genetic landscape of pediatric acute liver failure of indeterminate origin

D Lenz, LD Schlieben, M Shimura, A Bianzano… - Hepatology, 2024 - journals.lww.com
Results: In total, 260 indeterminate PALF patients from 19 countries were recruited between
2011 and 2022, of whom 59 had recurrent PALF. WES established a genetic diagnosis in …