Making choices: DNA replication fork recovery mechanisms

CM Kondratick, MT Washington, M Spies - Seminars in cell & …, 2021 - Elsevier
DNA replication is laden with obstacles that slow, stall, collapse, and break DNA replication
forks. At each obstacle, there is a decision to be made whether to bypass the lesion, repair …

DNA damage bypass pathways and their effect on mutagenesis in yeast

M Arbel, B Liefshitz, M Kupiec - FEMS microbiology reviews, 2021 - academic.oup.com
What is the origin of mutations? In contrast to the naïve notion that mutations are unfortunate
accidents, genetic research in microorganisms has demonstrated that most mutations are …

Carbon catabolite repression in yeast is not limited to glucose

K Simpson-Lavy, M Kupiec - Scientific reports, 2019 - nature.com
Cells adapt their gene expression and their metabolism in response to a changing
environment. Glucose represses expression of genes involved in the catabolism of other …

Spatial regulation of DNA damage tolerance protein Rad5 interconnects genome stability maintenance and proteostasis networks

CP Lehmann, P González-Fernández… - Nucleic Acids …, 2024 - academic.oup.com
The Rad5/HLTF protein has a central role in the tolerance to DNA damage by mediating an
error-free mode of bypassing unrepaired DNA lesions, and is therefore critical for the …

Rad5 recruits error-prone DNA polymerases for mutagenic repair of ssDNA gaps on undamaged templates

D Gallo, TH Kim, B Szakal, X Saayman, A Narula… - Molecular cell, 2019 - cell.com
Post-replication repair (PRR) allows tolerance of chemical-and UV-induced DNA base
lesions in both an error-free and an error-prone manner. In classical PRR, PCNA …

Regulation of HLTF-mediated PCNA polyubiquitination by RFC and PCNA monoubiquitination levels determines choice of damage tolerance pathway

Y Masuda, S Mitsuyuki, R Kanao, A Hishiki… - Nucleic acids …, 2018 - academic.oup.com
DNA-damage tolerance protects cells via at least two sub-pathways regulated by
proliferating cell nuclear antigen (PCNA) ubiquitination in eukaryotes: translesion DNA …

Post-translational modifications of PCNA: guiding for the best DNA damage tolerance choice

G Bellí, N Colomina, L Castells-Roca, NP Lorite - Journal of Fungi, 2022 - mdpi.com
The sliding clamp PCNA is a multifunctional homotrimer mainly linked to DNA replication.
During this process, cells must ensure an accurate and complete genome replication when …

Access to pcna by srs2 and elg1 controls the choice between alternative repair pathways in saccharomyces cerevisiae

M Arbel, A Bronstein, S Sau, B Liefshitz, M Kupiec - MBio, 2020 - Am Soc Microbiol
During DNA replication, stalling can occur when the replicative DNA polymerases encounter
lesions or hard-to replicate regions. Under these circumstances, the processivity factor …

Prevention of unwanted recombination at damaged replication forks

CP Lehmann, A Jiménez-Martín, D Branzei, JA Tercero - Current Genetics, 2020 - Springer
Homologous recombination is essential for the maintenance of genome integrity but must be
strictly controlled to avoid dangerous outcomes that produce the opposite effect, genomic …

Post-replication repair: Rad5/HLTF regulation, activity on undamaged templates, and relationship to cancer

D Gallo, GW Brown - Critical reviews in biochemistry and molecular …, 2019 - Taylor & Francis
The eukaryotic post-replication repair (PRR) pathway allows completion of DNA replication
when replication forks encounter lesions on the DNA template and are mediated by post …