First-passage times in renewal and nonrenewal systems

K Ptaszyński - Physical Review E, 2018 - APS
Fluctuations in stochastic systems are usually characterized by full counting statistics, which
analyzes the distribution of the number of events taking place in the fixed time interval. In an …

Counting quantum jumps: A summary and comparison of fixed-time and fluctuating-time statistics in electron transport

SL Rudge, DS Kosov - The Journal of Chemical Physics, 2019 - pubs.aip.org
In quantum transport through nanoscale devices, fluctuations arise from various sources: the
discreteness of charge carriers, the statistical nonequilibrium that is required for device …

Exact product formation rates for stochastic enzyme kinetics

R Grima, A Leier - The Journal of Physical Chemistry B, 2017 - ACS Publications
The rate of product formation is an important measure of the speed of enzyme reactions.
Classical studies of enzyme reactions have been conducted in dilute solutions and under …

Enzyme kinetics at the molecular level

A Dua - Resonance, 2019 - Springer
Abstract The celebrated Michaelis-Menten (MM) expression provides a fundamental relation
between the rate of enzyme catalysis and substrate concentration. The validity of this …

Nonrenewal statistics in transport through quantum dots

K Ptaszyński - Physical Review B, 2017 - APS
The distribution of waiting times between successive tunneling events is an already
established method to characterize current fluctuations in mesoscopic systems. Here, I …

Non-renewal statistics for electron transport in a molecular junction with electron-vibration interaction

DS Kosov - The Journal of Chemical Physics, 2017 - pubs.aip.org
Quantum transport of electrons through a molecule is a series of individual electron
tunneling events separated by stochastic waiting time intervals. We study the emergence of …

Parallel versus off-pathway Michaelis–Menten mechanism for single-enzyme kinetics of a fluctuating enzyme

A Kumar, H Maity, A Dua - The Journal of Physical Chemistry B, 2015 - ACS Publications
Recent fluorescence spectroscopy measurements of the turnover time distribution of single-
enzyme turnover kinetics of β-galactosidase provide evidence of Michaelis–Menten kinetics …

Single-molecule enzyme kinetics in the presence of inhibitors

S Saha, A Sinha, A Dua - The Journal of chemical physics, 2012 - pubs.aip.org
Recent studies in single-molecule enzyme kinetics reveal that the turnover statistics of a
single enzyme is governed by the waiting time distribution that decays as mono-exponential …

Molecular noise-induced activator-inhibitor duality in enzyme inhibition kinetics

M Panigrahy, A Dua - The Journal of Chemical Physics, 2023 - pubs.aip.org
Classical theories of enzyme inhibition kinetics predict a monotonic decrease in the mean
catalytic activity with the increase in inhibitor concentration. The steady-state result, derived …

Nonclassical kinetics of clonal yet heterogeneous enzymes

SJ Park, S Song, IC Jeong, HR Koh… - The journal of physical …, 2017 - ACS Publications
Enzyme-to-enzyme variation in the catalytic rate is ubiquitous among single enzymes
created from the same genetic information, which persists over the lifetimes of living cells …