Development and applications of a high throughput genotyping tool for polyploid crops: single nucleotide polymorphism (SNP) array

Q You, X Yang, Z Peng, L Xu, J Wang - Frontiers in Plant Science, 2018 - frontiersin.org
Polypoid species play significant roles in agriculture and food production. Many crop
species are polyploid, such as potato, wheat, strawberry, and sugarcane. Genotyping has …

Oats in healthy gluten-free and regular diets: A perspective

MJM Smulders, CCM van de Wiel… - Food Research …, 2018 - Elsevier
During the 20th century, the economic position of oats (Avena sativa L.) decreased strongly
in favour of higher yielding crops including winter wheat and maize. Presently, oat …

Characterization of polyploid wheat genomic diversity using a high‐density 90 000 single nucleotide polymorphism array

S Wang, D Wong, K Forrest, A Allen… - Plant biotechnology …, 2014 - Wiley Online Library
High‐density single nucleotide polymorphism (SNP) genotyping arrays are a powerful tool
for studying genomic patterns of diversity, inferring ancestral relationships between …

Using genotyping-by-sequencing (GBS) for genomic discovery in cultivated oat

YF Huang, JA Poland, CP Wight, EW Jackson… - PloS one, 2014 - journals.plos.org
Advances in next-generation sequencing offer high-throughput and cost-effective
genotyping alternatives, including genotyping-by-sequencing (GBS). Results have shown …

Haplotype‐based genotyping‐by‐sequencing in oat genome research

WA Bekele, CP Wight, S Chao… - Plant biotechnology …, 2018 - Wiley Online Library
In a de novo genotyping‐by‐sequencing (GBS) analysis of short, 64‐base tag‐level
haplotypes in 4657 accessions of cultivated oat, we discovered 164741 tag‐level (TL) …

Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species

PJ Maughan, R Lee, R Walstead, RJ Vickerstaff… - Bmc Biology, 2019 - Springer
Abstract Background Cultivated hexaploid oat (Common oat; Avena sativa) has held a
significant place within the global crop community for centuries; although its cultivation has …

GrainGenes: centralized small grain resources and digital platform for geneticists and breeders

VC Blake, MR Woodhouse, GR Lazo, SG Odell… - Database, 2019 - academic.oup.com
Abstract GrainGenes (https://wheat. pw. usda. gov or https://graingenes. org) is an
international centralized repository for curated, peer-reviewed datasets useful to researchers …

A consensus map in cultivated hexaploid oat reveals conserved grass synteny with substantial subgenome rearrangement

AS Chaffin, YF Huang, S Smith, WA Bekele… - The plant …, 2016 - Wiley Online Library
Hexaploid oat (Avena sativa L., 2n= 6x= 42) is a member of the Poaceae family and has a
large genome (∼ 12.5 Gb) containing 21 chromosome pairs from three ancestral genomes …

Aspects in oat breeding: nutrition quality, nakedness and disease resistance, challenges and perspectives

A Gorash, R Armonienė, J Mitchell Fetch… - Annals of Applied …, 2017 - Wiley Online Library
Traditionally, the oat crop (Avena sativa) has been neglected in a number of respects,
cultivated in cropping areas not optimal for wheat, barley or maize. In recent years the …

Oats—from farm to fork

R Menon, T Gonzalez, M Ferruzzi, E Jackson… - Advances in food and …, 2016 - Elsevier
Oats have a long history of use as human food and animal feed. From its origins in the
Fertile Crescent, the oat has adapted to a wide range of climatic conditions and geographic …