Apparent competition

RD Holt, MB Bonsall - Annual Review of Ecology, Evolution, and …, 2017 - annualreviews.org
Most species have one or more natural enemies, eg, predators, parasites, pathogens, and
herbivores, among others. These species in turn typically attack multiple victim species. This …

[HTML][HTML] Bacteriophages presence in nature and their role in the natural selection of bacterial populations

Z Naureen, A Dautaj, K Anpilogov… - Acta Bio Medica …, 2020 - ncbi.nlm.nih.gov
Phages are the obligate parasite of bacteria and have complex interactions with their hosts.
Phages can live in, modify, and shape bacterial communities by bringing about changes in …

[HTML][HTML] High-order species interactions shape ecosystem diversity

E Bairey, ED Kelsic, R Kishony - Nature communications, 2016 - nature.com
Classical theory shows that large communities are destabilized by random interactions
among species pairs, creating an upper bound on ecosystem diversity. However, species …

[HTML][HTML] Population cycles and species diversity in dynamic Kill-the-Winner model of microbial ecosystems

S Maslov, K Sneppen - Scientific reports, 2017 - nature.com
Determinants of species diversity in microbial ecosystems remain poorly understood.
Bacteriophages are believed to increase the diversity by the virtue of Kill-the-Winner …

[HTML][HTML] Effects of long term antibiotic therapy on human oral and fecal viromes

SR Abeles, M Ly, TM Santiago-Rodriguez, DT Pride - PloS one, 2015 - journals.plos.org
Viruses are integral members of the human microbiome. Many of the viruses comprising the
human virome have been identified as bacteriophage, and little is known about how they …

Phage life cycles behind bacterial biodiversity

T Olszak, A Latka, B Roszniowski… - Current medicinal …, 2017 - ingentaconnect.com
Bacteriophages (phages or bacterial viruses) are the most abundant biological entities in
our planet; their influence reaches far beyond the microorganisms they parasitize. Phages …

[HTML][HTML] Phage predation accelerates the spread of plasmid-encoded antibiotic resistance

C Ruan, J Ramoneda, A Kan, TJ Rudge… - Nature …, 2024 - nature.com
Phage predation is generally assumed to reduce microbial proliferation while not
contributing to the spread of antibiotic resistance. However, this assumption does not …

[HTML][HTML] From kill the winner to eliminate the winner in open phage-bacteria systems

A Marantos, N Mitarai, K Sneppen - PLoS Computational Biology, 2022 - journals.plos.org
Phages and bacteria manage to coexist and sustain ecosystems with a high diversity of
strains, despite limited resources and heavy predation. This diversity can be explained by …

A growing microcolony can survive and support persistent propagation of virulent phages

RS Eriksen, SL Svenningsen… - Proceedings of the …, 2018 - National Acad Sciences
Bacteria form colonies and secrete extracellular polymeric substances that surround the
individual cells. These spatial structures are often associated with collaboration and quorum …

The structure of probabilistic networks

T Poisot, AR Cirtwill, K Cazelles… - Methods in Ecology …, 2016 - Wiley Online Library
There is a growing realization among community ecologists that interactions between
species vary across space and time and that this variation needs to be quantified. Our …