Calnexin cycle–structural features of the ER chaperone system

G Kozlov, K Gehring - The FEBS journal, 2020 - Wiley Online Library
The endoplasmic reticulum (ER) is the major folding compartment for secreted and
membrane proteins and is the site of a specific chaperone system, the calnexin cycle, for …

Protein disulfide isomerase: a critical evaluation of its function in disulfide bond formation

F Hatahet, LW Ruddock - Antioxidants & redox signaling, 2009 - liebertpub.com
Disulfide bond formation is probably involved in the biogenesis of approximately one third of
human proteins. A central player in this essential process is protein disulfide isomerase or …

A structural overview of the PDI family of proteins

G Kozlov, P Määttänen, DY Thomas… - The FEBS …, 2010 - Wiley Online Library
Protein disulfide isomerases (PDIs) are enzymes that mediate oxidative protein folding in the
endoplasmic reticulum. Understanding of PDIs has historically been hampered by lack of …

Protein disulfide–isomerase, a folding catalyst and a redox-regulated chaperone

L Wang, X Wang, C Wang - Free Radical Biology and Medicine, 2015 - Elsevier
Protein disulfide–isomerase (PDI) was the first protein-folding catalyst to be characterized,
half a century ago. It plays critical roles in a variety of physiological events by displaying …

How proteins form disulfide bonds

M Depuydt, J Messens, JF Collet - Antioxidants & redox signaling, 2011 - liebertpub.com
The identification of protein disulfide isomerase, almost 50 years ago, opened the way to the
study of oxidative protein folding. Oxidative protein folding refers to the composite process …

A secreted tyrosine kinase acts in the extracellular environment

MR Bordoli, J Yum, SB Breitkopf, JN Thon, JE Italiano… - Cell, 2014 - cell.com
Although tyrosine phosphorylation of extracellular proteins has been reported to occur
extensively in vivo, no secreted protein tyrosine kinase has been identified. As a result …

Gadolinium tagging for high-precision measurements of 6 nm distances in protein assemblies by EPR

H Yagi, D Banerjee, B Graham, T Huber… - Journal of the …, 2011 - ACS Publications
Double electron–electron resonance (DEER) distance measurements of a protein complex
tagged with two Gd3+ chelates developed for rigid positioning of the metal ion are shown to …

Three-dimensional protein fold determination from backbone amide pseudocontact shifts generated by lanthanide tags at multiple sites

H Yagi, KB Pilla, A Maleckis, B Graham, T Huber… - Structure, 2013 - cell.com
Site-specific attachment of paramagnetic lanthanide ions to a protein generates
pseudocontact shifts (PCS) in the nuclear magnetic resonance (NMR) spectra of the protein …

[HTML][HTML] Neural networks in pulsed dipolar spectroscopy: A practical guide

J Keeley, T Choudhury, L Galazzo, E Bordignon… - Journal of Magnetic …, 2022 - Elsevier
This is a methodological guide to the use of deep neural networks in the processing of
pulsed dipolar spectroscopy (PDS) data encountered in structural biology, organic …

The application of paramagnetic lanthanoid ions in NMR spectroscopy on proteins

WM Liu, M Overhand, M Ubbink - Coordination Chemistry Reviews, 2014 - Elsevier
Lanthanoids are gaining popularity as paramagnetic centers for high resolution nuclear
magnetic resonance (NMR) spectroscopy. They provide valuable angular and long-distance …