Qualitative and quantitative late blight resistance in the potato cultivar Sarpo Mira is determined by the perception of five distinct RXLR effectors

H Rietman, G Bijsterbosch, LM Cano… - Molecular Plant …, 2012 - Am Phytopath Society
Potato defends against Phytophthora infestans infection by resistance (R)-gene-based
qualitative resistance as well as a quantitative field resistance. R genes are renowned to be …

One prophage WO gene rescues cytoplasmic incompatibility in Drosophila melanogaster

JD Shropshire, J On, EM Layton… - Proceedings of the …, 2018 - National Acad Sciences
Wolbachia are maternally inherited, intracellular bacteria at the forefront of vector control
efforts to curb arbovirus transmission. In international field trials, the cytoplasmic …

Characterization of antibiotic resistance genes in the species of the rumen microbiota

YNV Sabino, MF Santana, LB Oyama… - Nature …, 2019 - nature.com
Infections caused by multidrug resistant bacteria represent a therapeutic challenge both in
clinical settings and in livestock production, but the prevalence of antibiotic resistance genes …

Androglobin: a chimeric globin in metazoans that is preferentially expressed in mammalian testes

D Hoogewijs, B Ebner, F Germani… - Molecular biology …, 2012 - academic.oup.com
Comparative genomic studies have led to the recent identification of several novel globin
types in the Metazoa. They have revealed a surprising evolutionary diversity of functions …

FREEDA: An automated computational pipeline guides experimental testing of protein innovation

D Dudka, RB Akins, MA Lampson - Journal of Cell Biology, 2023 - rupress.org
Cell biologists typically focus on conserved regions of a protein, overlooking innovations that
can shape its function over evolutionary time. Computational analyses can reveal potential …

PosiGene: automated and easy-to-use pipeline for genome-wide detection of positively selected genes

A Sahm, M Bens, M Platzer… - Nucleic Acids …, 2017 - academic.oup.com
Many comparative genomics studies aim to find the genetic basis of species-specific
phenotypic traits. A prevailing strategy is to search genome-wide for genes that evolved …

Virus excretion from foot-and-mouth disease virus carrier cattle and their potential role in causing new outbreaks

ABR Parthiban, M Mahapatra, S Gubbins, S Parida - PloS one, 2015 - journals.plos.org
The role of foot-and-mouth disease virus (FMDV) carrier cattle in causing new outbreaks is
still a matter of debate and it is important to find out these carrier animals by post-outbreak …

Living with stress: regulation of antioxidant defense genes in the subterranean, hypoxia-tolerant mole rat, Spalax

S Schülke, D Dreidax, A Malik, T Burmester, E Nevo… - Gene, 2012 - Elsevier
Lack of oxygen is life threatening for most mammals. It is therefore of biomedical interest to
investigate the adaptive mechanisms which enable mammalian species to tolerate …

Flourishing in water: the early evolution and diversification of plant receptor‐like kinases

Z Gong, GZ Han - The Plant Journal, 2021 - Wiley Online Library
Receptor‐like kinases (RLKs) play significant roles in mediating innate immunity and
development of plants. The evolution of plant RLKs has been characterized by extensive …

AlexandrusPS: a user-friendly pipeline for the automated detection of orthologous gene clusters and subsequent positive selection analysis

A Ceron-Noriega, VAC Schoonenberg… - Genome Biology and …, 2023 - academic.oup.com
The detection of adaptive selection in a system approach considering all protein-coding
genes allows for the identification of mechanisms and pathways that enabled adaptation to …