Metagenomics has revolutionized our understanding of microbial communities, offering
unprecedented insights into their genetic and functional diversity across Earth's diverse …

Genome search and/or classification typically involves finding the best-match database
(reference) genomes and has become increasingly challenging due to the growing number …

Metagenomics, the study of the genome sequences of diverse organisms in a common
environment, has led to significant advances in many fields. Since the species present in a …

Motivation Genomic distance estimation is a critical workload since exact computation for
whole-genome similarity metrics such as Average Nucleotide Identity (ANI) incurs prohibitive …

The bendability of genomic DNA, which measures the DNA looping rate, is crucial for
numerous biological processes of DNA. Recently, an advanced high-throughput technique …

Motivation Functional profiling of metagenomic samples is essential to decipher the
functional capabilities of microbial communities. Traditional and more widely used functional …

Metagenomics, the study of genome sequences of diverse organisms cohabiting in a shared
environment, has experienced significant advancements across various medical and …

Efficiently and accurately identifying which microbes are present in a biological sample is
important to medicine and biology. For example, in medicine, microbe identification allows …

Metagenomics has led to significant advancements in many fields. Metagenomic analysis
commonly involves the key tasks of determining the species present in a sample and their …

Genome search and/or classification is a key step in microbiome studies and has recently
become more challenging due to the increasing number of available (reference) genomes …