A review of root exudates and rhizosphere microbiome for crop production

H Sun, S Jiang, C Jiang, C Wu, M Gao… - … Science and Pollution …, 2021 - Springer
Increasing crop yields and ensuring food security is a major global challenge. In order to
increase crop production, chemical fertilizers and pesticides are excessively used. However …

How mycorrhizal associations influence orchid distribution and population dynamics

T Li, S Wu, W Yang, MA Selosse, J Gao - Frontiers in Plant Science, 2021 - frontiersin.org
Orchid distribution and population dynamics are influenced by a variety of ecological factors
and the formation of holobionts, which play key roles in colonization and ecological …

iNAP: an integrated network analysis pipeline for microbiome studies

K Feng, X Peng, Z Zhang, S Gu, Q He, W Shen, Z Wang… - imeta, 2022 - Wiley Online Library
Integrated network analysis pipeline (iNAP) is an online analysis pipeline for generating and
analyzing comprehensive ecological networks in microbiome studies. It is implemented in …

Warming reshaped the microbial hierarchical interactions

Y Zhou, B Sun, B Xie, K Feng, Z Zhang… - Global Change …, 2021 - Wiley Online Library
Global warming may alter microbially mediated ecosystem functions through reshaping of
microbial diversity and modified microbial interactions. Here, we examined the effects of 5 …

Temperature‐mediated microbial carbon utilization in China's lakes

Y Guo, S Gu, K Wu, AJ Tanentzap, J Yu… - Global Change …, 2023 - Wiley Online Library
Microbes play an important role in aquatic carbon cycling but we have a limited
understanding of their functional responses to changes in temperature across large …

High-throughput single-cell technology reveals the contribution of horizontal gene transfer to typical antibiotic resistance gene dissemination in wastewater treatment …

Z Wei, K Feng, Z Wang, Y Zhang, M Yang… - Environmental …, 2021 - ACS Publications
The spread of antibiotic resistance genes (ARGs) has gained much attention worldwide,
while the contribution of vertical gene transfer (VGT) and horizontal gene transfer (HGT) is …

Acidic amelioration of soil amendments improves soil health by impacting rhizosphere microbial assemblies

D Chen, X Wang, VJ Carrion, S Yin, Z Yue… - Soil Biology and …, 2022 - Elsevier
Intensive cultivation with accompanying nitrogen fertilization leads to soil acidification in
croplands of southern China, which in turn, imperils soil health, restricting the sustainability …

Geographical, climatic, and soil factors control the altitudinal pattern of rhizosphere microbial diversity and its driving effect on root zone soil multifunctionality in …

Y Yang, K Qiu, Y Xie, X Li, S Zhang, W Liu… - Science of the Total …, 2023 - Elsevier
Shifts in rhizosphere soil microorganisms of dominant plants' response to climate change
profoundly impact mountain soil ecosystem multifunctionality; relatively little is known about …

Resource-dependent biodiversity and potential multi-trophic interactions determine belowground functional trait stability

L Zhu, Y Chen, R Sun, J Zhang, L Hale, K Dumack… - Microbiome, 2023 - Springer
Background For achieving long-term sustainability of intensive agricultural practices, it is
pivotal to understand belowground functional stability as belowground organisms play …

Protists regulate microbially mediated organic carbon turnover in soil aggregates

H Liao, X Hao, Y Li, S Ma, S Gao, P Cai… - Global Change …, 2024 - Wiley Online Library
Soil protists, the major predator of bacteria and fungi, shape the taxonomic and functional
structure of soil microbiome via trophic regulation. However, how trophic interactions …