Genomic Selection in the Era of Next Generation Sequencing for Complex Traits in Plant Breeding

JA Bhat, S Ali, RK Salgotra, ZA Mir, S Dutta… - Frontiers in …, 2016 - frontiersin.org
Genomic selection (GS) is a promising approach exploiting molecular genetic markers to
design novel breeding programs and to develop new markers-based models for genetic …

Breeding better cultivars, faster: applications of new technologies for the rapid deployment of superior horticultural tree crops

S van Nocker, SE Gardiner - Horticulture Research, 2014 - academic.oup.com
Woody perennial plants, including trees that produce fruits and nuts of horticultural value,
typically have long breeding cycles, and development and introduction of improved cultivars …

Targeted sequence capture as a powerful tool for evolutionary analysis1

CE Grover, A Salmon, JF Wendel - American journal of botany, 2012 - Wiley Online Library
Next‐generation sequencing technologies (NGS) have revolutionized biological research by
significantly increasing data generation while simultaneously decreasing the time to data …

Skim sequencing: an advanced NGS technology for crop improvement

P Kumar, M Choudhary, BS Jat, B Kumar, V Singh… - Journal of Genetics, 2021 - Springer
High-throughput genotyping has become more convenient and cost-effective due to recent
advancements in next-generation sequencing (NGS) techniques. Numerous approaches …

Targeted enrichment of the black cottonwood (Populus trichocarpa) gene space using sequence capture

L Zhou, JA Holliday - BMC genomics, 2012 - Springer
Background High-throughput re-sequencing is rapidly becoming the method of choice for
studies of neutral and adaptive processes in natural populations across taxa. As re …

High‐throughput NGS‐based genotyping and phenotyping: Role in genomics‐assisted breeding for soybean improvement

JA Bhat, D Yu - Legume Science, 2021 - Wiley Online Library
Soybean is an important food crop that provides edible protein and oil for human and animal
nutrition. Conventional phenotypic‐based breeding approaches have made significant …

Exploiting genotyping by sequencing to characterize the genomic structure of the American cranberry through high-density linkage mapping

G Covarrubias-Pazaran, L Diaz-Garcia, B Schlautman… - BMC genomics, 2016 - Springer
Background The application of genotyping by sequencing (GBS) approaches, combined
with data imputation methodologies, is narrowing the genetic knowledge gap between major …

Heterosis patterns and sources of self-compatibility, cross-compatibility and key nut traits within single and double hybrid crosses of kola [Cola nitida (Vent) Schott …

D Nyadanu, ST Lowor, P Pobee, JA Dogbatse… - Scientific Reports, 2023 - nature.com
Sexual incompatibility among kola genotypes accounted for over 50% yield loss.
Compatible and high yielding varieties are in demand to develop commercial orchards. The …

Genomic selection prediction models comparing sequence capture and SNP array genotyping methods

BFX de Moraes, RF dos Santos, BM de Lima… - Molecular …, 2018 - Springer
The successful application of genomic selection (GS) approaches is dependent on genetic
makers derived from high-throughput and low-cost genotyping methods. Recent GS studies …

[PDF][PDF] Disentangling genetic variation and heterosis pattern for sexual compatibility and key nut traits within self, single and double hybrid crosses of kola [Cola nitida …

D Nyadanu, ST Lowor, P Pobee, JA Dogbatse… - Res Square, 2022 - academia.edu
Sexual incompatibility among kola genotypes accounted for over 50% yield loss.
Compatible and high yielding varieties are being searched to develop commercial orchards …