[HTML][HTML] TFMLAB: A MATLAB toolbox for 4D traction force microscopy
J Barrasa-Fano, A Shapeti, A Jorge-Penas… - SoftwareX, 2021 - Elsevier
We present TFMLAB, a MATLAB software package for 4D (x; y; z; t) Traction Force
Microscopy (TFM). While various TFM computational workflows are available in the …
Microscopy (TFM). While various TFM computational workflows are available in the …
Nonlinear Elastic Bottlebrush Polymer Hydrogels Modulate Actomyosin Mediated Protrusion Formation in Mesenchymal Stromal Cells
The nonlinear elasticity of many tissue‐specific extracellular matrices is difficult to
recapitulate without the use of fibrous architectures, which couple strain‐stiffening with …
recapitulate without the use of fibrous architectures, which couple strain‐stiffening with …
Sarc-Graph: Automated segmentation, tracking, and analysis of sarcomeres in hiPSC-derived cardiomyocytes
A better fundamental understanding of human induced pluripotent stem cell-derived
cardiomyocytes (hiPSC-CMs) has the potential to advance applications ranging from drug …
cardiomyocytes (hiPSC-CMs) has the potential to advance applications ranging from drug …
Three-dimensional analysis of hydrogel-imbedded aortic valve interstitial cell shape and its relation to contractile behavior
Cell-shape is a conglomerate of mechanical, chemical, and biological mechanisms that
reflects the cell biophysical state. In a specific application, we consider aortic valve interstitial …
reflects the cell biophysical state. In a specific application, we consider aortic valve interstitial …
[HTML][HTML] Functional differences in human aortic valve interstitial cells from patients with varying calcific aortic valve disease
Calcific aortic valve disease (CAVD) is characterized by progressive stiffening of aortic valve
(AV) tissues, inducing stenosis and insufficiency. Bicuspid aortic valve (BAV) is a common …
(AV) tissues, inducing stenosis and insufficiency. Bicuspid aortic valve (BAV) is a common …
SerialTrack: ScalE and rotation invariant augmented Lagrangian particle tracking
We present a new particle tracking algorithm for accurately resolving large deformation and
rotational motion fields, which takes advantage of both local and global particle tracking …
rotational motion fields, which takes advantage of both local and global particle tracking …
Dual-frame Fluid Motion Estimation with Test-time Optimization and Zero-divergence Loss
3D particle tracking velocimetry (PTV) is a key technique for analyzing turbulent flow, one of
the most challenging computational problems of our century. At the core of 3D PTV is the …
the most challenging computational problems of our century. At the core of 3D PTV is the …
Estimation of aortic valve interstitial cell-induced 3D remodeling of poly (ethylene glycol) hydrogel environments using an inverse finite element approach
Aortic valve interstitial cells (AVICs) reside within the leaflet tissues of the aortic valve and
maintain and remodel its extracellular matrix components. Part of this process is a result of …
maintain and remodel its extracellular matrix components. Part of this process is a result of …
An Inverse Modeling Approach to Estimate Three-Dimensional Aortic Valve Interstitial Cell Stress Fiber Force Levels
Within the aortic valve (AV) leaflet exists a population of interstitial cells (AVICs) that
maintain the constituent tissues by extracellular matrix (ECM) secretion, degradation, and …
maintain the constituent tissues by extracellular matrix (ECM) secretion, degradation, and …
On the three-dimensional correlation between myofibroblast shape and contraction
Myofibroblasts are responsible for wound healing and tissue repair across all organ
systems. In periods of growth and disease, myofibroblasts can undergo a phenotypic …
systems. In periods of growth and disease, myofibroblasts can undergo a phenotypic …