Energetics of drug–DNA interactions

JB Chaires - Biopolymers: Original Research on Biomolecules, 1997 - Wiley Online Library
Understanding the thermodynamics of drug binding to DNA is of both practical and
fundamental interest. The practical interest lies in the contribution that thermodynamics can …

Intercalation of organic dye molecules into double-stranded DNA--general principles and recent developments

H Ihmels, D Otto - Supermolecular dye chemistry, 2005 - Springer
Several aspects of the intercalation of organic dyes into DNA are presented. After a
description of general features of intercalation and the analytical evaluation of this binding …

Neither. DELTA.-nor. LAMBDA.-tris (phenanthroline) ruthenium (II) binds to DNA by classical intercalation

S Satyanarayana, JC Dabrowiak, JB Chaires - Biochemistry, 1992 - ACS Publications
MATERIALS AND METHODS Ruthenium Compounds. The synthesis and resolution of the
ruthenium compounds were as earlier described (Dwyer & Gyarfas, 1949; Dwyer et al …

[图书][B] Nucleic acids in chemistry and biology

GM Blackburn - 2006 - books.google.com
The structure, function and reactions of nucleic acids are central to molecular biology and
are crucial for the understanding of complex biological processes involved. Revised and …

Interaction of. delta.-and. lambda.-[Ru (phen) 2DPPZ] 2+ with DNA: a calorimetric and equilibrium binding study

I Haq, P Lincoln, D Suh, B Norden… - Journal of the …, 1995 - ACS Publications
Fluorescence and absorption spectroscopy, isothermal titration calorimetry, and viscosity
measurements have been used to characterize the interaction of and A [Ru (phen) 2DPPZ] …

Intercalative binding of small molecules to nucleic acids

DE Graves, LM Velea - Current Organic Chemistry, 2000 - benthamdirect.com
The interactions of small molecules with nucleic acids have provoked considerable interest
in the field of anticancer drug design over the past three decades; however, critical …

Molecular mechanism and binding free energy of doxorubicin intercalation in DNA

B Jawad, L Poudel, R Podgornik… - Physical Chemistry …, 2019 - pubs.rsc.org
The intercalation process of binding doxorubicin (DOX) in DNA is studied by extensive MD
simulations. Many molecular factors that control the binding affinity of DOX to DNA to form a …

[图书][B] Small molecule DNA and RNA binders: from synthesis to nucleic acid complexes

M Demeunynck, C Bailly, WD Wilson - 2006 - books.google.com
Die Entwicklung von Molekülen, die selektiv an Nucleinsäuren binden können, hat eine
ganze Reihe von Details über DNA-und RNA-Erkennungsprozesse geliefert. Die Palette an …

Thermodynamic extent of counterion release upon binding oligolysines to single-stranded nucleic acids.

DP Mascotti, TM Lohman - Proceedings of the National …, 1990 - National Acad Sciences
A major contribution to the binding free energy associated with most protein-nucleic acid
complexes is the increase in entropy due to counterion release from the nucleic acid that …

Counterion condensation revisited

GS Manning, J Ray - Journal of Biomolecular Structure and …, 1998 - Taylor & Francis
We review some of the characteristic properties of the structure of polyelectrolyte solutions:
the condensed layer of counterions that forms abruptly at a critical threshold charge density …