[HTML][HTML] Environmental microbiome mapping as a strategy to improve quality and safety in the food industry

F De Filippis, V Valentino, A Alvarez-Ordonez… - Current Opinion in Food …, 2021 - Elsevier
Highlights•Food industries environments harbor a resident microbiome.•Environmental
microbiome may represent a primary source of contamination.•Metagenomics allows …

Bioinformatic approaches for studying the microbiome of fermented food

LH Walsh, M Coakley, AM Walsh… - Critical Reviews in …, 2023 - Taylor & Francis
High-throughput DNA sequencing-based approaches continue to revolutionise our
understanding of microbial ecosystems, including those associated with fermented foods …

Role played by the environment in the emergence and spread of antimicrobial resistance (AMR) through the food chain

EFSA Panel on Biological Hazards (BIOHAZ)… - Efsa …, 2021 - Wiley Online Library
The role of food‐producing environments in the emergence and spread of antimicrobial
resistance (AMR) in EU plant‐based food production, terrestrial animals (poultry, cattle and …

[HTML][HTML] Antibiotic resistance in wild and commercial non-enterococcal Lactic Acid Bacteria and Bifidobacteria strains of dairy origin: An update

L Nunziata, M Brasca, S Morandi, T Silvetti - Food Microbiology, 2022 - Elsevier
Antibiotic Resistance is a growing concern for public health and global economy. Lactic acid
bacteria (LAB) involved in the production of dairy products and commonly present in the …

Quorum sensing in human gut and food microbiomes: Significance and potential for therapeutic targeting

AK Falà, A Álvarez-Ordóñez, A Filloux… - Frontiers in …, 2022 - frontiersin.org
Human gut and food microbiomes interact during digestion. The outcome of these
interactions influences the taxonomical composition and functional capacity of the resident …

Effectiveness of a phage cocktail as a potential biocontrol agent against saprophytic bacteria in ready-to-eat plant-based food

M Wójcicki, O Świder, I Gientka, S Błażejak… - Viruses, 2023 - mdpi.com
This study aimed to evaluate the effectiveness of the phage cocktail to improve the
microbiological quality of five different mixed-leaf salads: rucola, mixed-leaf salad with …

[HTML][HTML] Transcriptomic analysis reveals the antibiofilm mechanism of Lacticaseibacillus rhamnosus MS1 against Vibrio parahaemolyticus

X Zhang, W Shangguan, J Wang, Z Liao, X Fang… - LWT, 2023 - Elsevier
This study aimed to explore novel anti-biofilm agents from Lacticaseibacillus rhamnosus. We
found that the ethyl acetate extract of L. rhamnosus MS1 effectively reduced the motility …

Detection of antimicrobial resistance genes in the milk production environment: Impact of host DNA and sequencing depth

S Rubiola, F Chiesa, A Dalmasso, P Di Ciccio… - Frontiers in …, 2020 - frontiersin.org
Over the past decades, antimicrobial resistance (AMR) has been recognized as one of the
most serious threats to public health. Although originally considered a problem to human …

[HTML][HTML] Environmental influences on microbial community development during organic pinot noir wine production in outdoor and indoor fermentation conditions

A Ohwofasa, M Dhami, B Tian, C Winefield, SLW On - Heliyon, 2023 - cell.com
The role of microbial diversity in influencing the organoleptic properties of wine and other
fermented products is well est ablished, and understanding microbial dynamics within …

The detailed analysis of the microbiome and resistome of artisanal blue-veined cheeses provides evidence on sources and patterns of succession linked with quality …

EA Alexa, JF Cobo-Díaz, E Renes, TF O´ Callaghan… - Microbiome, 2024 - Springer
Background Artisanal cheeses usually contain a highly diverse microbial community which
can significantly impact their quality and safety. Here, we describe a detailed longitudinal …