Multipolar Atom Types from Theory and Statistical Clustering (MATTS) data bank: restructurization and extension of UBDB

KK Jha, B Gruza, A Sypko, P Kumar… - Journal of Chemical …, 2022 - ACS Publications
A fast and accurate operational model of electron density is crucial in many scientific
disciplines including crystallography, molecular biology, pharmaceutical, and structural …

[PDF][PDF] Applicability of transferable multipole pseudo-atoms for restoring inner-crystal electronic force density fields. Chemical bonding and binding features in the …

AF Saifina, SV Kartashov, LF Saifina, RR Fayzullin - IUCrJ, 2023 - journals.iucr.org
We considered it timely to test the applicability of transferable multipole pseudo-atoms for
restoring inner-crystal electronic force density fields. The procedure was carried out on the …

Vanishing of the atomic form factor derivatives in non-spherical structural refinement–a key approximation scrutinized in the case of Hirshfeld atom refinement

L Midgley, LJ Bourhis, OV Dolomanov… - … A: Foundations and …, 2021 - journals.iucr.org
When calculating derivatives of structure factors, there is one particular term (the derivatives
of the atomic form factors) that will always be zero in the case of tabulated spherical atomic …

[PDF][PDF] Hirshfeld atom like refinement with alternative electron density partitions

ML Chodkiewicz, M Woińska, K Woźniak - IUCrJ, 2020 - journals.iucr.org
Hirshfeld atom refinement is one of the most successful methods for the accurate
determination of structural parameters for hydrogen atoms from X-ray diffraction data. This …

[PDF][PDF] Dynamical refinement with multipolar electron scattering factors

B Olech, P Brázda, L Palatinus, PM Dominiak - IUCrJ, 2024 - journals.iucr.org
Dynamical refinement is a well established method for refining crystal structures against 3D
electron diffraction (ED) data and its benefits have been discussed in the literature …

[PDF][PDF] Aspherical atom refinements on X-ray data of diverse structures including disordered and covalent organic framework systems: a time–accuracy trade-off

KK Jha, F Kleemiss, ML Chodkiewicz… - Journal of Applied …, 2023 - journals.iucr.org
Aspherical atom refinement is the key to achieving accurate structure models, displacement
parameters, hydrogen-bond lengths and analysis of weak interactions, amongst other …

[PDF][PDF] Fragmentation and transferability in Hirshfeld atom refinement

M Chodkiewicz, S Pawlędzio, M Woińska, K Woźniak - IUCrJ, 2022 - journals.iucr.org
Hirshfeld atom refinement (HAR) is one of the most effective methods for obtaining accurate
structural parameters for hydrogen atoms from X-ray diffraction data. Unfortunately, it is also …

[HTML][HTML] Electron density is not spherical: the many applications of the transferable aspherical atom model

M Kulik, PM Dominiak - Computational and Structural Biotechnology …, 2022 - Elsevier
In the simplest approach and at low resolution, the electron density of an atom can be
approximated by a sphere. However, the resolutions currently achieved in X-ray …

[PDF][PDF] On the accuracy and precision of X-ray and neutron diffraction results as a function of resolution and the electron density model

WF Sanjuan-Szklarz, M Woińska, S Domagała… - IUCrJ, 2020 - journals.iucr.org
X-ray diffraction is the main source of three-dimensional structural information. In total, more
than 1.5 million crystal structures have been refined and deposited in structural databanks …

[PDF][PDF] Refinement of organic crystal structures with multipolar electron scattering factors

B Gruza, ML Chodkiewicz… - … A: Foundations and …, 2020 - journals.iucr.org
A revolution in resolution is occurring now in electron microscopy arising from the
development of methods for imaging single particles at cryogenic temperatures and …