Rise and SINE: Roles of transcription factors and retrotransposons in zygotic genome activation

P Kravchenko, K Tachibana - Nature Reviews Molecular Cell Biology, 2024 - nature.com
In sexually reproducing organisms, life begins with the fusion of transcriptionally silent
gametes, the oocyte and sperm. Although initiation of transcription in the embryo, known as …

Regulation of mammalian totipotency: a molecular perspective from in vivo and in vitro studies

T Nakatani, ME Torres-Padilla - Current Opinion in Genetics & …, 2023 - Elsevier
Highlights•Cellular models can recapitulate some aspects of embryonic genome
activation.•Multiple factors regulate embryonic genome activation.•Several types of totipotent …

OBOX regulates mouse zygotic genome activation and early development

S Ji, F Chen, P Stein, J Wang, Z Zhou, L Wang, Q Zhao… - Nature, 2023 - nature.com
Zygotic genome activation (ZGA) activates the quiescent genome to enable the maternal-to-
zygotic transition,. However, the identity of transcription factors that underlie mammalian …

CBP/p300 and HDAC activities regulate H3K27 acetylation dynamics and zygotic genome activation in mouse preimplantation embryos

M Wang, Z Chen, Y Zhang - The EMBO Journal, 2022 - embopress.org
Epigenome reprogramming after fertilization enables transcriptionally quiescent maternal
and paternal chromatin to acquire a permissive state for subsequent zygotic genome …

NR5A2 connects zygotic genome activation to the first lineage segregation in totipotent embryos

F Lai, L Li, X Hu, B Liu, Z Zhu, L Liu, Q Fan, H Tian… - Cell Research, 2023 - nature.com
Zygotic genome activation (ZGA) marks the beginning of the embryonic program for a
totipotent embryo, which gives rise to the inner cell mass (ICM) where pluripotent epiblast …

Mitotic bookmarking redundancy by nuclear receptors in pluripotent cells

A Chervova, A Molliex, HI Baymaz, RX Coux… - Nature Structural & …, 2024 - nature.com
Mitotic bookmarking transcription factors (TFs) are thought to mediate rapid and accurate
reactivation after mitotic gene silencing. However, the loss of individual bookmarking TFs …

Esrrb guides naive pluripotent cells through the formative transcriptional programme

E Carbognin, V Carlini, F Panariello, M Chieregato… - Nature cell …, 2023 - nature.com
During embryonic development, naive pluripotent epiblast cells transit to a formative state.
The formative epiblast cells form a polarized epithelium, exhibit distinct transcriptional and …

Distinct dynamics of parental 5-hydroxymethylcytosine during human preimplantation development regulate early lineage gene expression

D Liang, R Yan, X Long, D Ji, B Song, M Wang… - Nature Cell …, 2024 - nature.com
The conversion of DNA 5-methylcytosine (5mC) to 5-hydroxymethylcytosine (5hmC) by TET
enzymes represents a significant epigenetic modification, yet its role in early human …

Multifaceted SOX2-chromatin interaction underpins pluripotency progression in early embryos

L Li, F Lai, X Hu, B Liu, X Lu, Z Lin, L Liu, Y Xiang… - Science, 2023 - science.org
Pioneer transcription factors (TFs), such as OCT4 and SOX2, play crucial roles in
pluripotency regulation. However, the master TF-governed pluripotency regulatory circuitry …

The emergence of Sox and POU transcription factors predates the origins of animal stem cells

Y Gao, DS Tan, M Girbig, H Hu, X Zhou, Q Xie… - Nature …, 2024 - nature.com
Stem cells are a hallmark of animal multicellularity. Sox and POU transcription factors are
associated with stemness and were believed to be animal innovations, reported absent in …