Graph theoretical framework of brain networks in multiple sclerosis: a review of concepts

V Fleischer, A Radetz, D Ciolac, M Muthuraman… - Neuroscience, 2019 - Elsevier
Network science provides powerful access to essential organizational principles of the
human brain. It has been applied in combination with graph theory to characterize brain …

Evaluating white matter lesion segmentations with refined Sørensen-Dice analysis

A Carass, S Roy, A Gherman, JC Reinhold, A Jesson… - Scientific reports, 2020 - nature.com
The Sørensen-Dice index (SDI) is a widely used measure for evaluating medical image
segmentation algorithms. It offers a standardized measure of segmentation accuracy which …

Longitudinal multiple sclerosis lesion segmentation: resource and challenge

A Carass, S Roy, A Jog, JL Cuzzocreo, E Magrath… - NeuroImage, 2017 - Elsevier
In conjunction with the ISBI 2015 conference, we organized a longitudinal lesion
segmentation challenge providing training and test data to registered participants. The …

Comparing fully automated state-of-the-art cerebellum parcellation from magnetic resonance images

A Carass, JL Cuzzocreo, S Han… - Neuroimage, 2018 - Elsevier
The human cerebellum plays an essential role in motor control, is involved in cognitive
function (ie, attention, working memory, and language), and helps to regulate emotional …

Consistent cortical reconstruction and multi-atlas brain segmentation

Y Huo, AJ Plassard, A Carass, SM Resnick, DL Pham… - NeuroImage, 2016 - Elsevier
Whole brain segmentation and cortical surface reconstruction are two essential techniques
for investigating the human brain. Spatial inconsistences, which can hinder further …

Construction of 4D high-definition cortical surface atlases of infants: Methods and applications

G Li, L Wang, F Shi, JH Gilmore, W Lin, D Shen - Medical image analysis, 2015 - Elsevier
In neuroimaging, cortical surface atlases play a fundamental role for spatial normalization,
analysis, visualization, and comparison of results across individuals and different studies …

DeepLesionBrain: Towards a broader deep-learning generalization for multiple sclerosis lesion segmentation

RA Kamraoui, VT Ta, T Tourdias, B Mansencal… - Medical Image …, 2022 - Elsevier
Recently, segmentation methods based on Convolutional Neural Networks (CNNs) showed
promising performance in automatic Multiple Sclerosis (MS) lesions segmentation. These …

Neural deformation fields for template-based reconstruction of cortical surfaces from MRI

F Bongratz, AM Rickmann, C Wachinger - Medical Image Analysis, 2024 - Elsevier
The reconstruction of cortical surfaces is a prerequisite for quantitative analyses of the
cerebral cortex in magnetic resonance imaging (MRI). Existing segmentation-based …

Initial evidence of abnormal brain plasticity in anorexia nervosa: an ultra-high field study

E Pappaianni, B Borsarini, GE Doucet, A Hochman… - Scientific reports, 2022 - nature.com
Anorexia Nervosa has been associated with white matter abnormalities implicating
subcortical abnormal myelination. Extending these findings to intracortical myelin has been …

Effect of disease-modifying therapies on subcortical gray matter atrophy in multiple sclerosis

ES Sotirchos, N Gonzalez-Caldito… - Multiple Sclerosis …, 2020 - journals.sagepub.com
Background: The effects of disease-modifying therapies (DMTs) on region-specific brain
atrophy in multiple sclerosis (MS) are unclear. Objective: To determine the effects of higher …