Microbial transmission in the social microbiome and host health and disease
Although social interactions are known to drive pathogen transmission, the contributions of
socially transmissible host-associated mutualists and commensals to host health and …
socially transmissible host-associated mutualists and commensals to host health and …
Approaches and challenges to inferring the geographical source of infectious disease outbreaks using genomic data
Genomic data hold increasing potential in the elucidation of transmission dynamics and
geographical sources of infectious disease outbreaks. Phylogeographic methods that use …
geographical sources of infectious disease outbreaks. Phylogeographic methods that use …
Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA. 1
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants of concern (VOCs)
now arise in the context of heterogeneous human connectivity and population immunity …
now arise in the context of heterogeneous human connectivity and population immunity …
Dengue virus importation risks in Africa: a modelling study
J Poongavanan, J Lourenço, JLH Tsui… - The Lancet Planetary …, 2024 - thelancet.com
Background Dengue is a significant global public health concern that poses a threat in
Africa. Particularly, African countries are at risk of viral introductions through air travel …
Africa. Particularly, African countries are at risk of viral introductions through air travel …
Toward optimal disease surveillance with graph-based active learning
Tracking the spread of emerging pathogens is critical to the design of timely and effective
public health responses. Policymakers face the challenge of allocating finite resources for …
public health responses. Policymakers face the challenge of allocating finite resources for …
Drivers and impact of the early silent invasion of SARS-CoV-2 Alpha
B Faucher, CE Sabbatini, P Czuppon… - Nature …, 2024 - nature.com
SARS-CoV-2 variants of concern (VOCs) circulated cryptically before being identified as a
threat, delaying interventions. Here we studied the drivers of such silent spread and its …
threat, delaying interventions. Here we studied the drivers of such silent spread and its …
[HTML][HTML] From Emergence to Evolution: Dynamics of the SARS-CoV-2 Omicron Variant in Florida
S Ali, M Giovanetti, C Johnston, V Urdaneta-Páez… - Pathogens, 2024 - mdpi.com
The continual evolution of SARS-CoV-2 has significantly influenced the global response to
the COVID-19 pandemic, with the emergence of highly transmissible and immune-evasive …
the COVID-19 pandemic, with the emergence of highly transmissible and immune-evasive …
[HTML][HTML] Towards monitoring the invisible threat: a global approach for tackling AMR in water resources and environment
The global threat of antimicrobial resistance (AMR) is now increasingly recognized for the
danger posed by its environmental spread. Aquatic environments and wastewater represent …
danger posed by its environmental spread. Aquatic environments and wastewater represent …
[HTML][HTML] Integrated analyses of the transmission history of SARS-CoV-2 and its association with molecular evolution of the virus underlining the pandemic outbreaks in …
Background Italy was significantly affected by the COVID-19 pandemic, experiencing
multiple waves of infection following the sequential emergence of new variants …
multiple waves of infection following the sequential emergence of new variants …
Leveraging mobility data to analyze persistent SARS-CoV-2 mutations and inform targeted genomic surveillance
Given the rapid cross-country spread of SARS-CoV-2 and the resulting difficulty in tracking
lineage spread, we investigated the potential of combining mobile service data and fine …
lineage spread, we investigated the potential of combining mobile service data and fine …