A tutorial for information theory in neuroscience

NM Timme, C Lapish - eneuro, 2018 - eneuro.org
Understanding how neural systems integrate, encode, and compute information is central to
understanding brain function. Frequently, data from neuroscience experiments are …

Functional oxides for photoneuromorphic engineering: toward a solar brain

A Pérez‐Tomás - Advanced Materials Interfaces, 2019 - Wiley Online Library
New device concepts and new computing principles are needed to balance our ever‐
growing appetite for data and information with the realization of the goals of increased …

Rich-club organization in effective connectivity among cortical neurons

S Nigam, M Shimono, S Ito, FC Yeh… - Journal of …, 2016 - Soc Neuroscience
The performance of complex networks, like the brain, depends on how effectively their
elements communicate. Despite the importance of communication, it is virtually unknown …

Information-processing dynamics in neural networks of macaque cerebral cortex reflect cognitive state and behavior

TF Varley, O Sporns, S Schaffelhofer… - Proceedings of the …, 2023 - National Acad Sciences
One of the essential functions of biological neural networks is the processing of information.
This includes everything from processing sensory information to perceive the environment …

Self-organization of in vitro neuronal assemblies drives to complex network topology

PC Antonello, TF Varley, J Beggs, M Porcionatto… - Elife, 2022 - elifesciences.org
Activity-dependent self-organization plays an important role in the formation of specific and
stereotyped connectivity patterns in neural circuits. By combining neuronal cultures, and …

Information propagation in multilayer systems with higher-order interactions across timescales

G Nicoletti, DM Busiello - Physical Review X, 2024 - APS
Complex systems are characterized by multiple spatial and temporal scales. A natural
framework to capture their multiscale nature is that of multilayer networks, where different …

Identification of excitatory-inhibitory links and network topology in large-scale neuronal assemblies from multi-electrode recordings

VP Pastore, P Massobrio, A Godjoski… - PLoS computational …, 2018 - journals.plos.org
Functional-effective connectivity and network topology are nowadays key issues for studying
brain physiological functions and pathologies. Inferring neuronal connectivity from …

Criticality maximizes complexity in neural tissue

NM Timme, NJ Marshall, N Bennett, M Ripp… - Frontiers in …, 2016 - frontiersin.org
The analysis of neural systems leverages tools from many different fields. Drawing on
techniques from the study of critical phenomena in statistical mechanics, several studies …

High-degree neurons feed cortical computations

NM Timme, S Ito, M Myroshnychenko… - PLoS computational …, 2016 - journals.plos.org
Recent work has shown that functional connectivity among cortical neurons is highly varied,
with a small percentage of neurons having many more connections than others. Also, recent …

Estimating transfer entropy in continuous time between neural spike trains or other event-based data

DP Shorten, RE Spinney, JT Lizier - PLoS computational biology, 2021 - journals.plos.org
Transfer entropy (TE) is a widely used measure of directed information flows in a number of
domains including neuroscience. Many real-world time series for which we are interested in …