The cell killing mechanisms of hydroxyurea

A Singh, YJ Xu - Genes, 2016 - mdpi.com
Hydroxyurea is a well-established inhibitor of ribonucleotide reductase that has a long
history of scientific interest and clinical use for the treatment of neoplastic and non …

Fecal microbiota manipulation prevents dysbiosis and alcohol-induced liver injury in mice

G Ferrere, L Wrzosek, F Cailleux, W Turpin… - Journal of …, 2017 - Elsevier
Background & Aims Alcoholic liver disease (ALD) is a leading cause of liver failure and
mortality. In humans, severe alcoholic hepatitis is associated with key changes to intestinal …

High-resolution network biology: connecting sequence with function

CJ Ryan, P Cimermančič, ZA Szpiech, A Sali… - Nature Reviews …, 2013 - nature.com
Proteins are not monolithic entities; rather, they can contain multiple domains that mediate
distinct interactions, and their functionality can be regulated through post-translational …

A genome-wide resource of cell cycle and cell shape genes of fission yeast

J Hayles, V Wood, L Jeffery, KL Hoe… - Open …, 2013 - royalsocietypublishing.org
To identify near complete sets of genes required for the cell cycle and cell shape, we have
visually screened a genome-wide gene deletion library of 4843 fission yeast deletion …

Genomic evidence for adaptation by gene duplication

W Qian, J Zhang - Genome research, 2014 - genome.cshlp.org
Gene duplication is widely believed to facilitate adaptation, but unambiguous evidence for
this hypothesis has been found in only a small number of cases. Although gene duplication …

Bartender: a fast and accurate clustering algorithm to count barcode reads

L Zhao, Z Liu, SF Levy, S Wu - Bioinformatics, 2018 - academic.oup.com
Motivation Barcode sequencing (bar-seq) is a high-throughput, and cost effective method to
assay large numbers of cell lineages or genotypes in complex cell pools. Because of its …

Large-scale chemical–genetics yields new M. tuberculosis inhibitor classes

EO Johnson, E LaVerriere, E Office, M Stanley… - Nature, 2019 - nature.com
New antibiotics are needed to combat rising levels of resistance, with new Mycobacterium
tuberculosis (Mtb) drugs having the highest priority. However, conventional whole-cell and …

[HTML][HTML] Celastrol inhibits lung cancer growth by triggering histone acetylation and acting synergically with HDAC inhibitors

G Chen, X Zhu, J Li, Y Zhang, X Wang, R Zhang… - Pharmacological …, 2022 - Elsevier
Alterations in histone modification have been linked to cancer development and
progression. Celastrol, a Chinese herbal compound, shows potent anti-tumor effects through …

Design and analysis of Bar-seq experiments

DG Robinson, W Chen, JD Storey… - G3: Genes, Genomes …, 2014 - academic.oup.com
High-throughput quantitative DNA sequencing enables the parallel phenotyping of pools of
thousands of mutants. However, the appropriate analytical methods and experimental …

Global analysis of fission yeast mating genes reveals new autophagy factors

LL Sun, M Li, F Suo, XM Liu, EZ Shen, B Yang… - PLoS …, 2013 - journals.plos.org
Macroautophagy (autophagy) is crucial for cell survival during starvation and plays important
roles in animal development and human diseases. Molecular understanding of autophagy …