Profiling the B cell immune response elicited by vaccination against the respiratory virus SARS-CoV-2

E Pettini, D Medaglini, A Ciabattini - Frontiers in Immunology, 2022 - frontiersin.org
B cells play a fundamental role in host defenses against viral infections. Profiling the B cell
response elicited by SARS-CoV-2 vaccination, including the generation and persistence of …

Single-cell immune repertoire analysis

SE Irac, MSF Soon, N Borcherding, ZK Tuong - Nature Methods, 2024 - nature.com
Single-cell T cell and B cell antigen receptor-sequencing data analysis can potentially
perform in-depth assessments of adaptive immune cells that inform on understanding …

[HTML][HTML] Longitudinal single-cell analysis of SARS-CoV-2–reactive B cells uncovers persistence of early-formed, antigen-specific clones

L Scharf, H Axelsson, A Emmanouilidi, NR Mathew… - JCI insight, 2023 - ncbi.nlm.nih.gov
Understanding persistence and evolution of B cell clones after COVID-19 infection and
vaccination is crucial for predicting responses against emerging viral variants and optimizing …

Comparative global B cell receptor repertoire difference induced by SARS-CoV-2 infection or vaccination via single-cell V (D) J sequencing

B He, S Liu, M Xu, Y Hu, K Lv, Y Wang… - Emerging Microbes & …, 2022 - Taylor & Francis
Dynamic changes of the paired heavy and light chain B cell receptor (BCR) repertoire
provide an essential insight into understanding the humoral immune response post-SARS …

Antibody class-switching as a strategy to improve HIV-1 neutralization

C Scheepers, SI Richardson, T Moyo-Gwete… - Trends in molecular …, 2022 - cell.com
Broadly neutralizing antibodies (bNAbs), when administered through passive immunization,
are protective against HIV-1 infection. Current HIV-1 vaccine strategies are aimed at guiding …

Altered somatic hypermutation patterns in COVID-19 patients classifies disease severity

M Safra, Z Tamari, P Polak, S Shiber, M Matan… - Frontiers in …, 2023 - frontiersin.org
Introduction The success of the human body in fighting SARS-CoV2 infection relies on
lymphocytes and their antigen receptors. Identifying and characterizing clinically relevant …

nf-core/airrflow: An adaptive immune receptor repertoire analysis workflow employing the Immcantation framework

G Gabernet, S Marquez, R Bjornson… - PLOS Computational …, 2024 - journals.plos.org
Adaptive Immune Receptor Repertoire sequencing (AIRR-seq) is a valuable experimental
tool to study the immune state in health and following immune challenges such as infectious …

Full-length single-cell BCR sequencing paired with RNA sequencing reveals convergent responses to pneumococcal vaccination

DM Morgan, YJ Zhang, JH Kim, MA Murillo… - Communications …, 2024 - nature.com
Single-cell RNA sequencing (scRNA-seq) can resolve transcriptional features from
individual cells, but scRNA-seq techniques capable of resolving the variable regions of B …

[HTML][HTML] Morphologic and molecular analysis of liver injury after SARS-CoV-2 vaccination reveals distinct characteristics

S Uzun, CP Zinner, AC Beenen, I Alborelli… - Journal of …, 2023 - Elsevier
Background & Aims Liver injury after COVID-19 vaccination is very rare and shows clinical
and histomorphological similarities with autoimmune hepatitis (AIH). Little is known about …

Characterization of SARS-CoV-2 Convalescent Patients' Serological Repertoire Reveals High Prevalence of Iso-RBD Antibodies

NC Curtis, S Shin, AP Hederman, RI Connor… - bioRxiv, 2023 - biorxiv.org
While our understanding of SARS-CoV-2 pathogenesis and antibody responses following
infection and vaccination has improved tremendously since the outbreak in 2019, the …