The emergence of 2-oxoglutarate as a master regulator metabolite

LF Huergo, R Dixon - Microbiology and Molecular Biology …, 2015 - Am Soc Microbiol
The metabolite 2-oxoglutarate (also known as α-ketoglutarate, 2-ketoglutaric acid, or
oxoglutaric acid) lies at the intersection between the carbon and nitrogen metabolic …

Carbon catabolite repression in Pseudomonas: optimizing metabolic versatility and interactions with the environment

F Rojo - FEMS microbiology reviews, 2010 - academic.oup.com
Metabolically versatile free-living bacteria have global regulation systems that allow cells to
selectively assimilate a preferred compound among a mixture of several potential carbon …

Pervasive regulatory functions of mRNA structure revealed by high-resolution SHAPE probing

AM Mustoe, S Busan, GM Rice, CE Hajdin… - Cell, 2018 - cell.com
Summary mRNAs can fold into complex structures that regulate gene expression. Resolving
such structures de novo has remained challenging and has limited our understanding of the …

Genome Sequence of an Obligate Intracellular Pathogen of Humans: Chlamydia trachomatis

RS Stephens, S Kalman, C Lammel, J Fan, R Marathe… - Science, 1998 - science.org
Analysis of the 1,042,519–base pair Chlamydia trachomatis genome revealed unexpected
features related to the complex biology of chlamydiae. Although chlamydiae lack many …

Complete Genome Sequence of Treponema pallidum, the Syphilis Spirochete

CM Fraser, SJ Norris, GM Weinstock, O White… - Science, 1998 - science.org
The complete genome sequence of Treponema pallidum was determined and shown to be
1,138,006 base pairs containing 1041 predicted coding sequences (open reading frames) …

Nitrogen Assimilation and Global Regulation in Escherichia coli

L Reitzer - Annual Reviews in Microbiology, 2003 - annualreviews.org
▪ Abstract Nitrogen limitation in Escherichia coli controls the expression of about 100 genes
of the nitrogen regulated (Ntr) response, including the ammonia-assimilating glutamine …

Carbon catabolite repression in bacteria

J Stülke, W Hillen - Current opinion in microbiology, 1999 - Elsevier
Carbon catabolite repression (CCR) is a regulatory mechanism by which the expression of
genes required for the utilization of secondary sources of carbon is prevented by the …

Nitrogen assimilation in Escherichia coli: putting molecular data into a systems perspective

WC van Heeswijk, HV Westerhoff… - … and Molecular Biology …, 2013 - Am Soc Microbiol
We present a comprehensive overview of the hierarchical network of intracellular processes
revolving around central nitrogen metabolism in Escherichia coli. The hierarchy intertwines …

Eubacterial sigma-factors

M Wösten - FEMS microbiology reviews, 1998 - academic.oup.com
The initiation of transcription is the most important step for gene regulation in eubacteria. To
initiate transcription, RNA polymerase has to associate with a small protein, known as a σ …

Regulation Systems of Bacteria such as Escherichia coli in Response to Nutrient Limitation and Environmental Stresses

K Shimizu - Metabolites, 2013 - mdpi.com
An overview was made to understand the regulation system of a bacterial cell such as
Escherichia coli in response to nutrient limitation such as carbon, nitrogen, phosphate …