popart: full‐feature software for haplotype network construction Page 1 APPLICATION
POPART: full-feature software for haplotype network construction Jessica W. Leigh* and David …

Phylogenetic analysis has changed greatly in the past decade, including the more
widespread appreciation of the idea that evolutionary histories are not always tree-like, and …

T-REX (Tree and reticulogram REConstruction) is a web server dedicated to the
reconstruction of phylogenetic trees, reticulation networks and to the inference of horizontal …

Background Phylogenies, ie, the evolutionary histories of groups of taxa, play a major role in
representing the interrelationships among biological entities. Many software tools for …

Until recently, rigorously reconstructing the many hybrid speciation events in plants has not
been practical because of the limited number of molecular markers available for plant …

This chapter presents a review of the mathematical techniques available to construct
phytogenies and to represent reticulate evolution. Phytogenies can be estimated using …

The evolutionary history of a set of species is usually described by a rooted phylogenetic
tree. Although it is generally undisputed that bifurcating speciation events and descent with …

Cultural artefacts, like genes and languages, reflect their history. The methodology of
inference of that history, however, has been a contentious question. Recent applications of …

We introduce NeighborNet, a network construction and data representation method that
combines aspects of the neighbor joining (NJ) and SplitsTree. Like NJ, NeighborNet uses …

Phylogenetic networks model the evolutionary history of sets of organisms when events
such as hybrid speciation and horizontal gene transfer occur. In spite of their widely …