With reference to reference genes: a systematic review of endogenous controls in gene expression studies

JR Chapman, J Waldenström - PloS one, 2015 - journals.plos.org
The choice of reference genes that are stably expressed amongst treatment groups is a
crucial step in real-time quantitative PCR gene expression studies. Recent guidelines have …

What determines growth potential and juvenile quality of farmed fish species?

LMP Valente, KA Moutou, LEC Conceicao… - Reviews in …, 2013 - Wiley Online Library
Enhanced production of high quality and healthy fry is a key target for a successful and
competitive expansion of the aquaculture industry. Although large quantities of fish larvae …

Small ocean temperature increases elicit stage-dependent changes in DNA methylation and gene expression in a fish, the European sea bass

D Anastasiadi, N Díaz, F Piferrer - Scientific Reports, 2017 - nature.com
In natural fish populations, temperature increases can result in shifts in important phenotypic
traits. DNA methylation is an epigenetic mechanism mediating phenotypic changes …

Epimutations in developmental genes underlie the onset of domestication in farmed European sea bass

D Anastasiadi, F Piferrer - Molecular Biology and Evolution, 2019 - academic.oup.com
Domestication of wild animals induces a set of phenotypic characteristics collectively known
as the domestication syndrome. However, how this syndrome emerges is still not clear …

Skin mucus proteome map of European sea bass (Dicentrarchus labrax)

H Cordero, MF Brinchmann, A Cuesta, J Meseguer… - …, 2015 - Wiley Online Library
Skin mucus is the first barrier of fish defence. Proteins from skin mucus of European sea
bass (Dicentrarchus labrax) were identified by 2DE followed by LC‐MS/MS. From all the …

Evaluation of internal control genes for qRT-PCR normalization in tissues and cell culture for antiviral studies of grass carp (Ctenopharyngodon idella)

J Su, R Zhang, J Dong, C Yang - Fish & Shellfish Immunology, 2011 - Elsevier
Real-time quantitative reverse transcription polymerase chain reaction (qRT-PCR) has
become one of the most commonly used techniques for RNA expression. To obtain more …

Extreme winter cold-induced osmoregulatory, metabolic, and physiological responses in European seabass (Dicentrarchus labrax) acclimatized at different salinities

MJ Islam, A Kunzmann, MJ Slater - Science of the Total Environment, 2021 - Elsevier
Despite climate-change challenges, for most aquaculture species, physiological responses
to different salinities during ambient extreme cold events remain unknown. Here, European …

Dynamic epimarks in sex-related genes predict gonad phenotype in the European sea bass, a fish with mixed genetic and environmental sex determination

D Anastasiadi, M Vandeputte, N Sanchez-Baizan… - Epigenetics, 2018 - Taylor & Francis
The integration of genomic and environmental influences into methylation patterns to bring
about a phenotype is of central interest in developmental epigenetics, but many details are …

Metabolic and molecular stress responses of European seabass, Dicentrarchus labrax at low and high temperature extremes

MJ Islam, A Kunzmann, M Bögner, A Meyer, R Thiele… - Ecological …, 2020 - Elsevier
Extreme water temperatures related to global climate change represent a significant
challenge in terms of fish welfare and aquaculture productivity. Understanding the effect of …

Genome-wide identification and evaluation of novel internal control genes for Q-PCR based transcript normalization in wheat

XY Long, JR Wang, T Ouellet, H Rocheleau… - Plant molecular …, 2010 - Springer
To accurately quantify gene expression using quantitative PCR amplification, it is vital that
one or more ideal internal control genes are used to normalize the samples to be compared …