Single particle tracking: from theory to biophysical applications

H Shen, LJ Tauzin, R Baiyasi, W Wang… - Chemical …, 2017 - ACS Publications
After three decades of developments, single particle tracking (SPT) has become a powerful
tool to interrogate dynamics in a range of materials including live cells and novel catalytic …

Segmentation and image analysis of abnormal lungs at CT: current approaches, challenges, and future trends

A Mansoor, U Bagci, B Foster, Z Xu, GZ Papadakis… - Radiographics, 2015 - pubs.rsna.org
The computer-based process of identifying the boundaries of lung from surrounding thoracic
tissue on computed tomographic (CT) images, which is called segmentation, is a vital first …

Use of deep learning for detailed severity characterization and estimation of 5-year risk among patients with age-related macular degeneration

PM Burlina, N Joshi, KD Pacheco, DE Freund… - JAMA …, 2018 - jamanetwork.com
Importance Although deep learning (DL) can identify the intermediate or advanced stages of
age-related macular degeneration (AMD) as a binary yes or no, stratified gradings using the …

Isolation and detection of DNA–protein crosslinks in mammalian cells

I Torrecilla, A Ruggiano, K Kiianitsa… - Nucleic Acids …, 2024 - academic.oup.com
DNA–protein crosslinks (DPCs) are toxic DNA lesions wherein a protein is covalently
attached to DNA. If not rapidly repaired, DPCs create obstacles that disturb DNA replication …

Suma

ZS Saad, RC Reynolds - Neuroimage, 2012 - Elsevier
Surface-based brain imaging analysis offers the advantages of preserving the topology of
cortical activation, increasing statistical power of group-level statistics, estimating cortical …

Crowdsourcing for bioinformatics

BM Good, AI Su - Bioinformatics, 2013 - academic.oup.com
Motivation: Bioinformatics is faced with a variety of problems that require human
involvement. Tasks like genome annotation, image analysis, knowledge-base population …

Texture and shape analysis of diffusion‐weighted imaging for thyroid nodules classification using machine learning

A Sharafeldeen, M Elsharkawy, R Khaled… - Medical …, 2022 - Wiley Online Library
Purpose To assess whether the integration between (a) functional imaging features that will
be extracted from diffusion‐weighted imaging (DWI); and (b) shape and texture imaging …

The role of artificial intelligence in cardiovascular imaging: state of the art review

K Seetharam, D Brito, PD Farjo… - Frontiers in …, 2020 - frontiersin.org
In this current digital landscape, artificial intelligence (AI) has established itself as a powerful
tool in the commercial industry and is an evolving technology in healthcare. Cutting-edge …

MIRIAM: A machine and deep learning single‐cell segmentation and quantification pipeline for multi‐dimensional tissue images

ET McKinley, J Shao, ST Ellis, CN Heiser… - Cytometry Part …, 2022 - Wiley Online Library
Increasingly, highly multiplexed tissue imaging methods are used to profile protein
expression at the single‐cell level. However, a critical limitation is the lack of robust cell …

A multi-scale u-net for semantic segmentation of histological images from radical prostatectomies

J Li, KV Sarma, KC Ho, A Gertych… - AMIA Annual …, 2018 - pmc.ncbi.nlm.nih.gov
Gleason grading of histological images is important in risk assessment and treatment
planning for prostate cancer patients. Much research has been done in classifying small …