Mechanisms of drug combinations: interaction and network perspectives

J Jia, F Zhu, X Ma, ZW Cao, YX Li… - Nature reviews Drug …, 2009 - nature.com
Understanding the molecular mechanisms underlying synergistic, potentiative and
antagonistic effects of drug combinations could facilitate the discovery of novel efficacious …

DrugMiner: comparative analysis of machine learning algorithms for prediction of potential druggable proteins

AA Jamali, R Ferdousi, S Razzaghi, J Li, R Safdari… - Drug discovery today, 2016 - Elsevier
Highlights•Developing a novel machine learning tool for prediction of potential druggable
proteins.•Remarkable high performance of employed models in prediction.•Introducing new …

Combining global and local measures for structure-based druggability predictions

A Volkamer, D Kuhn, T Grombacher… - Journal of chemical …, 2012 - ACS Publications
Predicting druggability and prioritizing certain disease modifying targets for the drug
development process is of high practical relevance in pharmaceutical research …

XGB-DrugPred: computational prediction of druggable proteins using eXtreme gradient boosting and optimized features set

R Sikander, A Ghulam, F Ali - Scientific reports, 2022 - nature.com
Accurate identification of drug-targets in human body has great significance for designing
novel drugs. Compared with traditional experimental methods, prediction of drug-targets via …

Update of TTD: therapeutic target database

F Zhu, BC Han, P Kumar, XH Liu, XH Ma… - Nucleic acids …, 2010 - academic.oup.com
Increasing numbers of proteins, nucleic acids and other molecular entities have been
explored as therapeutic targets, hundreds of which are targets of approved and clinical trial …

Accurate prediction of potential druggable proteins based on genetic algorithm and Bagging-SVM ensemble classifier

J Lin, H Chen, S Li, Y Liu, X Li, B Yu - Artificial intelligence in medicine, 2019 - Elsevier
Discovering and accurately locating drug targets is of great significance for the research and
development of new drugs. As a different approach to traditional drug development, the …

Machine learning-based model for accurate identification of druggable proteins using light extreme gradient boosting

O Alghushairy, F Ali, W Alghamdi, M Khalid… - Journal of …, 2024 - Taylor & Francis
The identification of druggable proteins (DPs) is significant for the development of new
drugs, personalized medicine, understanding of disease mechanisms, drug repurposing …

[HTML][HTML] The applications of deep learning algorithms on in silico druggable proteins identification

L Yu, L Xue, F Liu, Y Li, R Jing, J Luo - Journal of Advanced Research, 2022 - Elsevier
Introduction The top priority in drug development is to identify novel and effective drug
targets. In vitro assays are frequently used for this purpose; however, traditional …

Prediction of potential drug targets based on simple sequence properties

Q Li, L Lai - BMC bioinformatics, 2007 - Springer
Background During the past decades, research and development in drug discovery have
attracted much attention and efforts. However, only 324 drug targets are known for clinical …

[HTML][HTML] Non-small molecule PROTACs (NSM-PROTACs): protein degradation kaleidoscope

S Ma, J Ji, Y Tong, Y Zhu, J Dou, X Zhang, S Xu… - … Pharmaceutica Sinica B, 2022 - Elsevier
The proteolysis targeting chimeras (PROTACs) technology has been rapidly developed
since its birth in 2001, attracting rapidly growing attention of scientific institutes and …