Evidence that mutation is universally biased towards AT in bacteria

R Hershberg, DA Petrov - PLoS genetics, 2010 - journals.plos.org
Mutation is the engine that drives evolution and adaptation forward in that it generates the
variation on which natural selection acts. Mutation is a random process that nevertheless …

On the correlation between genomic G+ C content and optimal growth temperature in prokaryotes: data quality and confounding factors

HC Wang, E Susko, AJ Roger - Biochemical and biophysical research …, 2006 - Elsevier
The correlation between genomic G+ C content and optimal growth temperature in
prokaryotes has gained renewed interest after Musto et al.[H. Musto, H. Naya, A. Zavala, H …

A positive correlation between GC content and growth temperature in prokaryotes

EZ Hu, XR Lan, ZL Liu, J Gao, DK Niu - BMC genomics, 2022 - Springer
Background GC pairs are generally more stable than AT pairs; GC-rich genomes were
proposed to be more adapted to high temperatures than AT-rich genomes. Previous studies …

Genomic GC level, optimal growth temperature, and genome size in prokaryotes

H Musto, H Naya, A Zavala, H Romero… - Biochemical and …, 2006 - Elsevier
Two years ago, we showed that positive correlations between optimal growth temperature
(Topt) and genome GC are observed in 15 out of the 20 families of prokaryotes we analyzed …

On the origin of genomic adaptation at high temperature for prokaryotic organisms

S Basak, TC Ghosh - Biochemical and Biophysical Research …, 2005 - Elsevier
For a long time, the central issue of evolutionary genomics was to find out the adaptive
strategy of nucleic acid molecules of various microorganisms having different optimal growth …

Gene-centric association analysis for the correlation between the guanine-cytosine content levels and temperature range conditions of prokaryotic species

H Zheng, H Wu - BMC bioinformatics, 2010 - Springer
Background The environment has been playing an instrumental role in shaping and
maintaining the morphological, physiological and biochemical diversities of prokaryotes. It …

Aerobic prokaryotes do not have higher GC contents than anaerobic prokaryotes, but obligate aerobic prokaryotes have

S Aslam, XR Lan, BW Zhang, ZL Chen, L Wang… - BMC Evolutionary …, 2019 - Springer
Background Among the four bases, guanine is the most susceptible to damage from
oxidative stress. Replication of DNA containing damaged guanines results in G to T …

Putative mitochondrial polypeptides coded by expanded quadruplet codons, decoded by antisense tRNAs with unusual anticodons

H Seligmann - Biosystems, 2012 - Elsevier
Weak triplet codon–anticodon interactions render ribosome-free translation unlikely. Some
modern tRNAs read quadruplet codons (tetracodons), suggesting vestigial ribosome-free …

Synonymous codon usage and its potential link with optimal growth temperature in prokaryotes

JR Lobry, A Necşulea - Gene, 2006 - Elsevier
The relationship between codon usage in prokaryotes and their ability to grow at extreme
temperatures has been given much attention over the past years. Previous studies have …

GC content variability of eubacteria is governed by the pol III α subunit

X Zhao, Z Zhang, J Yan, J Yu - Biochemical and biophysical research …, 2007 - Elsevier
Eubacterial genomes have highly variable GC content (0.17–0.75) and the primary
mechanism of such variability remains unknown. The place to look for is what actually …