Evolutionary history of Ebola virus

YH Li, SP Chen - Epidemiology & Infection, 2014 - cambridge.org
Since Ebola virus was discovered in 1970s, the virus has persisted in Africa and sporadic
fatal outbreaks in humans and non-human primates have been reported. However, the …

Restricted genetic diversity of HIV-1 subtype C envelope glycoprotein from perinatally infected Zambian infants

H Zhang, DC Tully, FG Hoffmann, J He, C Kankasa… - PloS one, 2010 - journals.plos.org
Background Mother-to-child transmission of HIV-1 remains a significant problem in the
resource-constrained settings where anti-retroviral therapy is still not widely available …

Selected amino acid mutations in HIV-1 B subtype gp41 are Associated with Specific gp120V3signatures in the regulation of Co-Receptor usage

S Dimonte, F Mercurio, V Svicher, R D'Arrigo, CF Perno… - Retrovirology, 2011 - Springer
Background The third variable loop (V3) of the HIV-1 gp120 surface protein is a major
determinant of cellular co-receptor binding. However, HIV-1 can also modulate its tropism …

Diversity of HIV-1 subtype B: implications to the origin of BF recombinants

É Leal, FE Villanova - PloS one, 2010 - journals.plos.org
Background The HIV-1 subtype B epidemic in Brazil is peculiar because of the high
frequency of isolates having the GWGR tetramer at V3 loop region. It has been suggested …

Selected amino acid changes in HIV-1 subtype-C gp41 are associated with specific gp120V3 signatures in the regulation of co-receptor usage

S Dimonte, M Babakir-Mina, F Mercurio, D Di Pinto… - Virus research, 2012 - Elsevier
The majority of studies have characterized the tropism of HIV-1 subtype-B isolates, but little
is known about the determinants of tropism in other subtypes. So, the goal of the present …

Dynamic features of the selective pressure on the human immunodeficiency virus type 1 (HIV-1) gp120 CD4-binding site in a group of long term non progressor (LTNP …

F Canducci, MC Marinozzi, M Sampaolo, S Berrè… - Retrovirology, 2009 - Springer
The characteristics of intra-host human immunodeficiency virus type 1 (HIV-1) env evolution
were evaluated in untreated HIV-1-infected subjects with different patterns of disease …

Association of HIV diversity and survival in HIV-infected Ugandan infants

MM James, L Wang, P Musoke, D Donnell, J Fogel… - PLoS …, 2011 - journals.plos.org
Background The level of viral diversity in an HIV-infected individual can change during the
course of HIV infection, reflecting mutagenesis during viral replication and selection of viral …

[HTML][HTML] Molecular and structural characterization of HIV-1 subtype B Brazilian isolates with GWGR tetramer at the tip of the V3-loop

É Leal, WP Silva, MC Sucupira, LM Janini, RS Diaz - Virology, 2008 - Elsevier
One of most intriguing features of the HIV-1 subtype B epidemic in Brazil is the high
frequency of isolates exhibiting tryptophan (W) in the tetramer (GWGR) at the tip of the V3 …

Use of a high resolution melting assay to analyze HIV diversity in HIV-infected Ugandan children

MM James, L Wang, D Donnell… - The Pediatric …, 2012 - journals.lww.com
Background: We used a novel high resolution melting (HRM) diversity assay to analyze HIV
diversity in Ugandan children (age 0.6–12.4 years) who were enrolled in an observational …

Codon pairs of the HIV-1 vif gene correlate with CD4+ T cell count

MC Bizinoto, S Yabe, É Leal, H Kishino… - BMC Infectious …, 2013 - Springer
Abstract Background The human APOBEC3G (A3G) protein activity is associated with innate
immunity against HIV-1 by inducing high rates of guanosines to adenosines (G-to-A) …