Recent advances in biocatalysis with chemical modification and expanded amino acid alphabet

AD Pagar, MD Patil, DT Flood, TH Yoo… - Chemical …, 2021 - ACS Publications
The two main strategies for enzyme engineering, directed evolution and rational design,
have found widespread applications in improving the intrinsic activities of proteins. Although …

Chemical modification of enzymes to improve biocatalytic performance

P Giri, AD Pagar, MD Patil, H Yun - Biotechnology Advances, 2021 - Elsevier
Improvement in intrinsic enzymatic features is in many instances a prerequisite for the
scalable applicability of many industrially important biocatalysts. To this end, various …

Maximum allowed solvent accessibilites of residues in proteins

MZ Tien, AG Meyer, DK Sydykova, SJ Spielman… - PloS one, 2013 - journals.plos.org
The relative solvent accessibility (RSA) of a residue in a protein measures the extent of
burial or exposure of that residue in the 3D structure. RSA is frequently used to describe a …

Trimethylamine N-oxide stabilizes proteins via a distinct mechanism compared with betaine and glycine

YT Liao, AC Manson, MR DeLyser… - Proceedings of the …, 2017 - National Acad Sciences
We report experimental and computational studies investigating the effects of three
osmolytes, trimethylamine N-oxide (TMAO), betaine, and glycine, on the hydrophobic …

Transition metal-free tryptophan-selective bioconjugation of proteins

Y Seki, T Ishiyama, D Sasaki, J Abe… - Journal of the …, 2016 - ACS Publications
Chemical modifications of native proteins can facilitate production of supernatural protein
functions that are not easily accessible by complementary methods relying on genetic …

Peptide/protein–polymer conjugates: synthetic strategies and design concepts

MA Gauthier, HA Klok - Chemical Communications, 2008 - pubs.rsc.org
This feature article provides a compilation of tools available for preparing well-defined
peptide/protein–polymer conjugates, which are defined as hybrid constructs combining (i) a …

Site-selective protein chemical modification of exposed tyrosine residues using tyrosine click reaction

S Sato, M Matsumura, T Kadonosono, S Abe… - Bioconjugate …, 2020 - ACS Publications
Targeting less abundant amino acid residues on the protein surface may realize site-
selective protein modification of natural proteins. The relative hydrophobicity of tyrosine …

Dissection of the amyloid formation pathway in AL amyloidosis

P Kazman, RM Absmeier, H Engelhardt… - Nature …, 2021 - nature.com
In antibody light chain (AL) amyloidosis, overproduced light chain (LC) fragments
accumulate as fibrils in organs and tissues of patients. In vitro, AL fibril formation is a slow …

Surface-initiated controlled radical polymerizations from silica nanoparticles, gold nanocrystals, and bionanoparticles

L Wu, U Glebe, A Böker - Polymer Chemistry, 2015 - pubs.rsc.org
In recent years, core/shell nanohybrids containing a nanoparticle core and a distinct
surrounding shell of polymer brushes have received extensive attention in nanoelectronics …

Chemical modification of proteins–challenges and trends at the start of the 2020s

NH Fischer, MT Oliveira, F Diness - Biomaterials Science, 2023 - pubs.rsc.org
Ribosomally expressed proteins perform multiple, versatile, and specialized tasks
throughout Nature. In modern times, chemically modified proteins, including improved …