Strategies to access biosynthetic novelty in bacterial genomes for drug discovery

F Hemmerling, J Piel - Nature Reviews Drug Discovery, 2022 - nature.com
Bacteria provide a rich source of natural products with potential therapeutic applications,
such as novel antibiotic classes or anticancer drugs. Bioactivity-guided screening of …

Evolution and diversity of assembly-line polyketide synthases: Focus review

A Nivina, KP Yuet, J Hsu, C Khosla - Chemical reviews, 2019 - ACS Publications
Assembly-line polyketide synthases (PKSs) are among the most complex protein
machineries known in nature, responsible for the biosynthesis of numerous compounds …

[HTML][HTML] Standardized multi-omics of Earth's microbiomes reveals microbial and metabolite diversity

JP Shaffer, LF Nothias, LR Thompson, JG Sanders… - Nature …, 2022 - nature.com
Despite advances in sequencing, lack of standardization makes comparisons across studies
challenging and hampers insights into the structure and function of microbial communities …

[HTML][HTML] A roadmap for metagenomic enzyme discovery

SL Robinson, J Piel, S Sunagawa - Natural Product Reports, 2021 - pubs.rsc.org
Covering: up to 2021 Metagenomics has yielded massive amounts of sequencing data
offering a glimpse into the biosynthetic potential of the uncultivated microbial majority. While …

Biosynthetic potential of uncultured Antarctic soil bacteria revealed through long-read metagenomic sequencing

V Waschulin, C Borsetto, R James… - The ISME …, 2022 - academic.oup.com
The growing problem of antibiotic resistance has led to the exploration of uncultured
bacteria as potential sources of new antimicrobials. PCR amplicon analyses and short-read …

[HTML][HTML] Fungal endophytes: a potential source of antibacterial compounds

SK Deshmukh, L Dufossé, H Chhipa, S Saxena… - Journal of Fungi, 2022 - mdpi.com
Antibiotic resistance is becoming a burning issue due to the frequent use of antibiotics for
curing common bacterial infections, indicating that we are running out of effective antibiotics …

Recent advances in heterologous expression of natural product biosynthetic gene clusters in Streptomyces hosts

HS Kang, ES Kim - Current Opinion in Biotechnology, 2021 - Elsevier
The heterologous expression of natural product biosynthetic gene clusters (BGCs) has
traditionally been used as a genetic platform to link various natural product chemotypes to …

Identification of structurally diverse menaquinone-binding antibiotics with in vivo activity against multidrug-resistant pathogens

L Li, B Koirala, Y Hernandez, LW MacIntyre… - Nature …, 2022 - nature.com
The emergence of multidrug-resistant bacteria poses a threat to global health and
necessitates the development of additional in vivo active antibiotics with diverse modes of …

[HTML][HTML] Phages carry interbacterial weapons encoded by biosynthetic gene clusters

A Dragoš, AJC Andersen, CN Lozano-Andrade… - Current Biology, 2021 - cell.com
Bacteria produce diverse specialized metabolites that mediate ecological interactions and
serve as a rich source of industrially relevant natural products. Biosynthetic pathways for …

[HTML][HTML] Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics

MW Van Goethem, AR Osborn, BP Bowen… - Communications …, 2021 - nature.com
Microbial biosynthetic gene clusters (BGCs) encoding secondary metabolites are thought to
impact a plethora of biologically mediated environmental processes, yet their discovery and …